Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
P04214 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
P04214 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
P04214 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
P04214 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
P04214 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
P04214 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
P04214 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
P04214 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
P04214 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
P04214 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
P04214 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
P04214 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
P04214 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.33■□□□□ 0.36
P04214 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.33■□□□□ 0.36
P04214 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
P04214 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.33■□□□□ 0.36
P04214 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
P04214 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
P04214 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.32■□□□□ 0.36
P04214 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04214 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.32■□□□□ 0.36
P04214 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04214 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
P04214 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
P04214 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04214 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.32■□□□□ 0.36
P04214 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04214 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.32■□□□□ 0.36
P04214 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.32■□□□□ 0.36
P04214 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.32■□□□□ 0.36
P04214 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.32■□□□□ 0.36
P04214 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04214 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.32■□□□□ 0.36
P04214 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
P04214 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
P04214 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
P04214 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04214 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04214 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04214 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
P04214 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04214 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04214 Gm25406-201ENSMUST00000157599 105 ntBASIC17.31■□□□□ 0.36
P04214 Gm26308-201ENSMUST00000157768 69 ntBASIC17.31■□□□□ 0.36
P04214 Gm7063-201ENSMUST00000186840 981 ntBASIC17.31■□□□□ 0.36
P04214 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
P04214 Gm8969-201ENSMUST00000199694 526 ntBASIC17.31■□□□□ 0.36
P04214 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04214 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04214 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.31■□□□□ 0.36
P04214 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04214 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04214 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
P04214 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04214 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04214 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04214 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04214 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.31■□□□□ 0.36
P04214 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
P04214 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.3■□□□□ 0.36
P04214 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04214 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
P04214 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
P04214 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04214 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04214 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
P04214 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.3■□□□□ 0.36
P04214 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
P04214 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.3■□□□□ 0.36
P04214 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.3■□□□□ 0.36
P04214 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.3■□□□□ 0.36
P04214 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
P04214 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
P04214 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04214 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
P04214 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.3■□□□□ 0.36
P04214 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
P04214 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
P04214 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
P04214 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04214 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04214 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P04214 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04214 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.29■□□□□ 0.36
P04214 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
P04214 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
P04214 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P04214 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04214 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P04214 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04214 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04214 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04214 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04214 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04214 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04214 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P04214 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04214 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04214 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms