Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Col4a1P02463 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col4a1P02463 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC20.33■□□□□ 0.85
Col4a1P02463 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col4a1P02463 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Col4a1P02463 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC20.33■□□□□ 0.85
Col4a1P02463 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Col4a1P02463 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC20.33■□□□□ 0.85
Col4a1P02463 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Col4a1P02463 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Col4a1P02463 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Col4a1P02463 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col4a1P02463 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col4a1P02463 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col4a1P02463 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col4a1P02463 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a1P02463 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a1P02463 AC154222.1-201ENSMUST00000223882 475 ntBASIC20.32■□□□□ 0.84
Col4a1P02463 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a1P02463 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a1P02463 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a1P02463 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Col4a1P02463 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a1P02463 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Col4a1P02463 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a1P02463 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a1P02463 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.32■□□□□ 0.84
Col4a1P02463 Gm8000-201ENSMUST00000188378 592 ntBASIC20.32■□□□□ 0.84
Col4a1P02463 Gm5264-201ENSMUST00000190584 848 ntBASIC20.32■□□□□ 0.84
Col4a1P02463 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC20.32■□□□□ 0.84
Col4a1P02463 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a1P02463 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Col4a1P02463 AC122901.1-201ENSMUST00000214203 1790 ntBASIC20.31■□□□□ 0.84
Col4a1P02463 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Col4a1P02463 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col4a1P02463 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col4a1P02463 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col4a1P02463 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col4a1P02463 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Col4a1P02463 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col4a1P02463 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Col4a1P02463 Gm25911-201ENSMUST00000157621 56 ntBASIC20.31■□□□□ 0.84
Col4a1P02463 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col4a1P02463 Gm5682-201ENSMUST00000173402 505 ntBASIC20.31■□□□□ 0.84
Col4a1P02463 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC20.31■□□□□ 0.84
Col4a1P02463 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col4a1P02463 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col4a1P02463 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col4a1P02463 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col4a1P02463 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col4a1P02463 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col4a1P02463 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col4a1P02463 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC20.3■□□□□ 0.84
Col4a1P02463 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col4a1P02463 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC20.3■□□□□ 0.84
Col4a1P02463 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col4a1P02463 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col4a1P02463 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col4a1P02463 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Col4a1P02463 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Col4a1P02463 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col4a1P02463 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Col4a1P02463 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col4a1P02463 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col4a1P02463 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col4a1P02463 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col4a1P02463 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col4a1P02463 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col4a1P02463 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC20.29■□□□□ 0.84
Col4a1P02463 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC20.29■□□□□ 0.84
Col4a1P02463 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC20.29■□□□□ 0.84
Col4a1P02463 AC159106.1-201ENSMUST00000224421 690 ntBASIC20.29■□□□□ 0.84
Col4a1P02463 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
Col4a1P02463 Gm36858-201ENSMUST00000194501 2391 ntBASIC20.29■□□□□ 0.84
Col4a1P02463 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.29■□□□□ 0.84
Col4a1P02463 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col4a1P02463 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Col4a1P02463 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC20.29■□□□□ 0.84
Col4a1P02463 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC20.29■□□□□ 0.84
Col4a1P02463 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC20.29■□□□□ 0.84
Col4a1P02463 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.29■□□□□ 0.84
Col4a1P02463 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.29■□□□□ 0.84
Col4a1P02463 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC20.29■□□□□ 0.84
Col4a1P02463 Gm14494-201ENSMUST00000118786 435 ntBASIC20.29■□□□□ 0.84
Col4a1P02463 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC20.29■□□□□ 0.84
Col4a1P02463 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Col4a1P02463 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC20.29■□□□□ 0.84
Col4a1P02463 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Col4a1P02463 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Col4a1P02463 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col4a1P02463 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Col4a1P02463 Gm10175-201ENSMUST00000086013 645 ntBASIC20.29■□□□□ 0.84
Col4a1P02463 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col4a1P02463 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col4a1P02463 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Col4a1P02463 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.28■□□□□ 0.84
Col4a1P02463 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Col4a1P02463 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Col4a1P02463 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Col4a1P02463 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms