Protein–RNA interactions for Protein: P01643

Ig kappa chain V-V region MOPC 173, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01643 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
P01643 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P01643 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
P01643 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
P01643 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
P01643 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.16□□□□□ -0.3
P01643 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P01643 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
P01643 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
P01643 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01643 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
P01643 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01643 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01643 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.15□□□□□ -0.3
P01643 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01643 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01643 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01643 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01643 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
P01643 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01643 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.15□□□□□ -0.3
P01643 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
P01643 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.15□□□□□ -0.3
P01643 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.15□□□□□ -0.3
P01643 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01643 Birc2-201ENSMUST00000054878 378 ntBASIC13.15□□□□□ -0.3
P01643 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01643 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
P01643 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01643 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
P01643 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01643 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01643 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
P01643 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
P01643 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.15□□□□□ -0.31
P01643 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
P01643 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
P01643 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01643 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
P01643 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01643 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.14□□□□□ -0.31
P01643 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01643 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.14□□□□□ -0.31
P01643 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01643 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.14□□□□□ -0.31
P01643 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.14□□□□□ -0.31
P01643 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.14□□□□□ -0.31
P01643 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01643 Gm10052-201ENSMUST00000168019 960 ntBASIC13.14□□□□□ -0.31
P01643 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.14□□□□□ -0.31
P01643 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
P01643 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
P01643 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
P01643 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.14□□□□□ -0.31
P01643 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.14□□□□□ -0.31
P01643 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
P01643 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01643 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
P01643 Gm7729-201ENSMUST00000050143 801 ntBASIC13.14□□□□□ -0.31
P01643 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01643 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
P01643 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01643 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
P01643 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
P01643 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
P01643 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01643 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01643 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01643 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01643 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01643 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
P01643 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
P01643 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
P01643 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
P01643 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01643 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01643 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01643 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
P01643 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01643 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.13□□□□□ -0.31
P01643 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.13□□□□□ -0.31
P01643 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.13□□□□□ -0.31
P01643 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
P01643 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01643 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
P01643 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01643 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01643 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
P01643 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01643 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01643 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
P01643 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
P01643 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
P01643 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
P01643 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
P01643 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
P01643 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.12□□□□□ -0.31
P01643 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P01643 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
P01643 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms