Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Syn1O88935 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Syn1O88935 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Syn1O88935 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Syn1O88935 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Syn1O88935 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.05■□□□□ 0.32
Syn1O88935 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Syn1O88935 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Syn1O88935 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Syn1O88935 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Syn1O88935 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.04■□□□□ 0.32
Syn1O88935 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Syn1O88935 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Syn1O88935 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Syn1O88935 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Syn1O88935 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Syn1O88935 Gm27321-201ENSMUST00000185021 205 ntBASIC17.04■□□□□ 0.32
Syn1O88935 Gm6550-201ENSMUST00000187574 993 ntBASIC17.04■□□□□ 0.32
Syn1O88935 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.04■□□□□ 0.32
Syn1O88935 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Syn1O88935 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.04■□□□□ 0.32
Syn1O88935 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.04■□□□□ 0.32
Syn1O88935 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Syn1O88935 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Syn1O88935 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Syn1O88935 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Syn1O88935 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Syn1O88935 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Syn1O88935 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Syn1O88935 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Syn1O88935 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.04■□□□□ 0.32
Syn1O88935 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Syn1O88935 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Syn1O88935 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syn1O88935 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syn1O88935 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Syn1O88935 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.03■□□□□ 0.32
Syn1O88935 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syn1O88935 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syn1O88935 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syn1O88935 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syn1O88935 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.03■□□□□ 0.32
Syn1O88935 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syn1O88935 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.03■□□□□ 0.32
Syn1O88935 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syn1O88935 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syn1O88935 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Syn1O88935 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syn1O88935 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syn1O88935 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Syn1O88935 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Syn1O88935 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syn1O88935 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syn1O88935 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syn1O88935 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.02■□□□□ 0.32
Syn1O88935 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syn1O88935 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syn1O88935 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syn1O88935 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syn1O88935 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syn1O88935 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syn1O88935 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Syn1O88935 Gm14701-201ENSMUST00000117156 348 ntBASIC17.02■□□□□ 0.32
Syn1O88935 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.02■□□□□ 0.32
Syn1O88935 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syn1O88935 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.02■□□□□ 0.32
Syn1O88935 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Syn1O88935 Gm18421-201ENSMUST00000204122 625 ntBASIC17.02■□□□□ 0.32
Syn1O88935 Gm7506-201ENSMUST00000207758 815 ntBASIC17.02■□□□□ 0.32
Syn1O88935 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syn1O88935 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syn1O88935 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Syn1O88935 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Syn1O88935 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Syn1O88935 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Syn1O88935 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Syn1O88935 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Syn1O88935 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Syn1O88935 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Syn1O88935 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Syn1O88935 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Syn1O88935 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Syn1O88935 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Syn1O88935 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Syn1O88935 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Syn1O88935 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Syn1O88935 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Syn1O88935 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Syn1O88935 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Syn1O88935 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Syn1O88935 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Syn1O88935 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Syn1O88935 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.01■□□□□ 0.31
Syn1O88935 Gm13036-201ENSMUST00000117799 748 ntBASIC17.01■□□□□ 0.31
Syn1O88935 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.01■□□□□ 0.31
Syn1O88935 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.01■□□□□ 0.31
Syn1O88935 Gm44450-201ENSMUST00000199528 114 ntBASIC17.01■□□□□ 0.31
Syn1O88935 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.01■□□□□ 0.31
Syn1O88935 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.01■□□□□ 0.31
Syn1O88935 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms