Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hdac3O88895 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hdac3O88895 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hdac3O88895 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hdac3O88895 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hdac3O88895 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hdac3O88895 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hdac3O88895 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hdac3O88895 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Hdac3O88895 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hdac3O88895 Il3ra-202ENSMUST00000223589 738 ntBASIC14.84□□□□□ -0.03
Hdac3O88895 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hdac3O88895 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hdac3O88895 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hdac3O88895 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hdac3O88895 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hdac3O88895 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Hdac3O88895 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hdac3O88895 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hdac3O88895 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.84□□□□□ -0.03
Hdac3O88895 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hdac3O88895 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Hdac3O88895 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hdac3O88895 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hdac3O88895 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Hdac3O88895 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hdac3O88895 Gm12085-201ENSMUST00000119263 940 ntBASIC14.83□□□□□ -0.04
Hdac3O88895 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.83□□□□□ -0.04
Hdac3O88895 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.83□□□□□ -0.04
Hdac3O88895 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hdac3O88895 Gm9731-201ENSMUST00000209480 747 ntBASIC14.83□□□□□ -0.04
Hdac3O88895 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Hdac3O88895 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hdac3O88895 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hdac3O88895 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hdac3O88895 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Hdac3O88895 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Hdac3O88895 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hdac3O88895 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hdac3O88895 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hdac3O88895 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Hdac3O88895 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Hdac3O88895 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.82□□□□□ -0.04
Hdac3O88895 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hdac3O88895 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hdac3O88895 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Hdac3O88895 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hdac3O88895 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hdac3O88895 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hdac3O88895 Gm7638-201ENSMUST00000121348 967 ntBASIC14.82□□□□□ -0.04
Hdac3O88895 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hdac3O88895 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.82□□□□□ -0.04
Hdac3O88895 Mir5122-201ENSMUST00000175004 89 ntBASIC14.82□□□□□ -0.04
Hdac3O88895 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hdac3O88895 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hdac3O88895 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hdac3O88895 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hdac3O88895 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hdac3O88895 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hdac3O88895 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.82□□□□□ -0.04
Hdac3O88895 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hdac3O88895 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hdac3O88895 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hdac3O88895 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hdac3O88895 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hdac3O88895 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hdac3O88895 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hdac3O88895 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hdac3O88895 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hdac3O88895 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hdac3O88895 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hdac3O88895 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hdac3O88895 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hdac3O88895 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Hdac3O88895 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hdac3O88895 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hdac3O88895 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hdac3O88895 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hdac3O88895 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Hdac3O88895 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.81□□□□□ -0.04
Hdac3O88895 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.81□□□□□ -0.04
Hdac3O88895 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.81□□□□□ -0.04
Hdac3O88895 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hdac3O88895 Gm3375-201ENSMUST00000203929 796 ntBASIC14.81□□□□□ -0.04
Hdac3O88895 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.81□□□□□ -0.04
Hdac3O88895 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.81□□□□□ -0.04
Hdac3O88895 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hdac3O88895 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Hdac3O88895 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hdac3O88895 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hdac3O88895 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hdac3O88895 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hdac3O88895 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hdac3O88895 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Hdac3O88895 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hdac3O88895 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.81□□□□□ -0.04
Hdac3O88895 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hdac3O88895 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Hdac3O88895 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.8□□□□□ -0.04
Hdac3O88895 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms