Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ShdO88834 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ShdO88834 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ShdO88834 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ShdO88834 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ShdO88834 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ShdO88834 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ShdO88834 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.95■□□□□ 0.3
ShdO88834 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ShdO88834 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ShdO88834 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
ShdO88834 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.95■□□□□ 0.3
ShdO88834 Mir1668-201ENSMUST00000184114 107 ntBASIC16.95■□□□□ 0.3
ShdO88834 Gm7977-201ENSMUST00000193787 748 ntBASIC16.95■□□□□ 0.3
ShdO88834 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ShdO88834 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.95■□□□□ 0.3
ShdO88834 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.95■□□□□ 0.3
ShdO88834 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
ShdO88834 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
ShdO88834 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ShdO88834 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ShdO88834 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ShdO88834 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ShdO88834 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ShdO88834 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ShdO88834 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ShdO88834 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ShdO88834 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ShdO88834 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ShdO88834 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ShdO88834 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ShdO88834 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ShdO88834 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ShdO88834 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ShdO88834 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.94■□□□□ 0.3
ShdO88834 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ShdO88834 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.94■□□□□ 0.3
ShdO88834 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.94■□□□□ 0.3
ShdO88834 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ShdO88834 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ShdO88834 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ShdO88834 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.94■□□□□ 0.3
ShdO88834 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ShdO88834 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ShdO88834 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ShdO88834 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ShdO88834 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
ShdO88834 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.93■□□□□ 0.3
ShdO88834 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.93■□□□□ 0.3
ShdO88834 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
ShdO88834 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ShdO88834 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ShdO88834 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ShdO88834 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ShdO88834 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ShdO88834 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.93■□□□□ 0.3
ShdO88834 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.93■□□□□ 0.3
ShdO88834 Gm44450-201ENSMUST00000199528 114 ntBASIC16.93■□□□□ 0.3
ShdO88834 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ShdO88834 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ShdO88834 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
ShdO88834 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
ShdO88834 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ShdO88834 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ShdO88834 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ShdO88834 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ShdO88834 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ShdO88834 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ShdO88834 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ShdO88834 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ShdO88834 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ShdO88834 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ShdO88834 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ShdO88834 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ShdO88834 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ShdO88834 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ShdO88834 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ShdO88834 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
ShdO88834 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
ShdO88834 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.92■□□□□ 0.3
ShdO88834 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ShdO88834 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ShdO88834 Gm26039-201ENSMUST00000158152 144 ntBASIC16.92■□□□□ 0.3
ShdO88834 Gm18115-201ENSMUST00000221209 621 ntBASIC16.92■□□□□ 0.3
ShdO88834 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ShdO88834 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ShdO88834 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ShdO88834 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ShdO88834 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ShdO88834 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ShdO88834 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ShdO88834 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.92■□□□□ 0.3
ShdO88834 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ShdO88834 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ShdO88834 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.92■□□□□ 0.3
ShdO88834 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ShdO88834 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ShdO88834 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ShdO88834 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ShdO88834 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms