Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc6a20bO88575 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Slc6a20bO88575 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc6a20bO88575 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Slc6a20bO88575 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc6a20bO88575 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc6a20bO88575 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Slc6a20bO88575 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Slc6a20bO88575 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.07■□□□□ 0.48
Slc6a20bO88575 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc6a20bO88575 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.07■□□□□ 0.48
Slc6a20bO88575 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.07■□□□□ 0.48
Slc6a20bO88575 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Slc6a20bO88575 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Slc6a20bO88575 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.07■□□□□ 0.48
Slc6a20bO88575 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.07■□□□□ 0.48
Slc6a20bO88575 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Slc6a20bO88575 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc6a20bO88575 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a20bO88575 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Slc6a20bO88575 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a20bO88575 Gm8097-201ENSMUST00000117903 829 ntBASIC18.06■□□□□ 0.48
Slc6a20bO88575 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a20bO88575 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.06■□□□□ 0.48
Slc6a20bO88575 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a20bO88575 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.06■□□□□ 0.48
Slc6a20bO88575 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC18.06■□□□□ 0.48
Slc6a20bO88575 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.06■□□□□ 0.48
Slc6a20bO88575 Ndufaf2-202ENSMUST00000223734 556 ntBASIC18.06■□□□□ 0.48
Slc6a20bO88575 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a20bO88575 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a20bO88575 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.06■□□□□ 0.48
Slc6a20bO88575 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.06■□□□□ 0.48
Slc6a20bO88575 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.06■□□□□ 0.48
Slc6a20bO88575 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a20bO88575 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Slc6a20bO88575 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a20bO88575 Gm5648-201ENSMUST00000122244 1587 ntBASIC18.05■□□□□ 0.48
Slc6a20bO88575 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a20bO88575 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a20bO88575 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a20bO88575 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Slc6a20bO88575 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Slc6a20bO88575 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.05■□□□□ 0.48
Slc6a20bO88575 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a20bO88575 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.05■□□□□ 0.48
Slc6a20bO88575 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a20bO88575 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Slc6a20bO88575 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.05■□□□□ 0.48
Slc6a20bO88575 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a20bO88575 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a20bO88575 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a20bO88575 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a20bO88575 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a20bO88575 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a20bO88575 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.04■□□□□ 0.48
Slc6a20bO88575 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a20bO88575 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.04■□□□□ 0.48
Slc6a20bO88575 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a20bO88575 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a20bO88575 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a20bO88575 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a20bO88575 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a20bO88575 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a20bO88575 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a20bO88575 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.04■□□□□ 0.48
Slc6a20bO88575 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a20bO88575 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC18.04■□□□□ 0.48
Slc6a20bO88575 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Slc6a20bO88575 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a20bO88575 Rarb-207ENSMUST00000225921 2756 ntBASIC18.03■□□□□ 0.48
Slc6a20bO88575 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a20bO88575 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a20bO88575 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a20bO88575 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.03■□□□□ 0.48
Slc6a20bO88575 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.03■□□□□ 0.48
Slc6a20bO88575 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a20bO88575 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a20bO88575 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a20bO88575 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a20bO88575 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Slc6a20bO88575 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a20bO88575 Gm4459-201ENSMUST00000118750 468 ntBASIC18.03■□□□□ 0.48
Slc6a20bO88575 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a20bO88575 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a20bO88575 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a20bO88575 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Slc6a20bO88575 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Slc6a20bO88575 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a20bO88575 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.03■□□□□ 0.48
Slc6a20bO88575 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.03■□□□□ 0.48
Slc6a20bO88575 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a20bO88575 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Slc6a20bO88575 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a20bO88575 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a20bO88575 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a20bO88575 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.03■□□□□ 0.48
Slc6a20bO88575 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a20bO88575 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Slc6a20bO88575 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms