Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.11■□□□□ 0.17
Cacna1hO88427 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1hO88427 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.11■□□□□ 0.17
Cacna1hO88427 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.11■□□□□ 0.17
Cacna1hO88427 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Cacna1hO88427 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1hO88427 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1hO88427 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1hO88427 Mir449b-201ENSMUST00000104833 80 ntBASIC16.1■□□□□ 0.17
Cacna1hO88427 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1hO88427 Gm27646-201ENSMUST00000183989 110 ntBASIC16.1■□□□□ 0.17
Cacna1hO88427 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1hO88427 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Cacna1hO88427 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1hO88427 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1hO88427 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1hO88427 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cacna1hO88427 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.1■□□□□ 0.17
Cacna1hO88427 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacna1hO88427 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.09■□□□□ 0.17
Cacna1hO88427 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacna1hO88427 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Cacna1hO88427 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacna1hO88427 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cacna1hO88427 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacna1hO88427 Gm45612-201ENSMUST00000211320 160 ntBASIC16.09■□□□□ 0.17
Cacna1hO88427 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cacna1hO88427 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacna1hO88427 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacna1hO88427 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cacna1hO88427 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacna1hO88427 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacna1hO88427 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacna1hO88427 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cacna1hO88427 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cacna1hO88427 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cacna1hO88427 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Cacna1hO88427 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.08■□□□□ 0.17
Cacna1hO88427 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cacna1hO88427 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.08■□□□□ 0.17
Cacna1hO88427 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cacna1hO88427 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cacna1hO88427 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cacna1hO88427 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cacna1hO88427 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Cacna1hO88427 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.16
Cacna1hO88427 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cacna1hO88427 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.08■□□□□ 0.16
Cacna1hO88427 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Cacna1hO88427 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cacna1hO88427 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.08■□□□□ 0.16
Cacna1hO88427 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.08■□□□□ 0.16
Cacna1hO88427 Gm27301-201ENSMUST00000184012 127 ntBASIC16.08■□□□□ 0.16
Cacna1hO88427 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.08■□□□□ 0.16
Cacna1hO88427 Gm7653-201ENSMUST00000214567 508 ntBASIC16.08■□□□□ 0.16
Cacna1hO88427 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cacna1hO88427 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cacna1hO88427 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Cacna1hO88427 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Cacna1hO88427 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cacna1hO88427 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cacna1hO88427 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cacna1hO88427 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cacna1hO88427 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Cacna1hO88427 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cacna1hO88427 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cacna1hO88427 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Cacna1hO88427 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cacna1hO88427 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cacna1hO88427 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cacna1hO88427 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
Cacna1hO88427 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cacna1hO88427 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.07■□□□□ 0.16
Cacna1hO88427 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.07■□□□□ 0.16
Cacna1hO88427 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cacna1hO88427 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cacna1hO88427 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cacna1hO88427 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cacna1hO88427 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Cacna1hO88427 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Cacna1hO88427 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cacna1hO88427 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cacna1hO88427 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Cacna1hO88427 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cacna1hO88427 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Cacna1hO88427 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cacna1hO88427 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cacna1hO88427 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cacna1hO88427 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cacna1hO88427 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.06■□□□□ 0.16
Cacna1hO88427 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cacna1hO88427 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.06■□□□□ 0.16
Cacna1hO88427 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cacna1hO88427 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Cacna1hO88427 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cacna1hO88427 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cacna1hO88427 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cacna1hO88427 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.05■□□□□ 0.16
Cacna1hO88427 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cacna1hO88427 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms