Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm6184-201ENSMUST00000120403 1261 ntBASIC21.46■■□□□ 1.03
Ubr1O70481 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC21.46■■□□□ 1.03
Ubr1O70481 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC21.46■■□□□ 1.03
Ubr1O70481 Gm15590-201ENSMUST00000078419 552 ntBASIC21.46■■□□□ 1.03
Ubr1O70481 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ubr1O70481 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Ubr1O70481 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ubr1O70481 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ubr1O70481 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ubr1O70481 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ubr1O70481 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ubr1O70481 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ubr1O70481 Gm5264-201ENSMUST00000190584 848 ntBASIC21.46■■□□□ 1.03
Ubr1O70481 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC21.46■■□□□ 1.03
Ubr1O70481 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC21.45■■□□□ 1.03
Ubr1O70481 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Ubr1O70481 AC131586.3-201ENSMUST00000228355 1367 ntBASIC21.45■■□□□ 1.03
Ubr1O70481 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ubr1O70481 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ubr1O70481 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ubr1O70481 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ubr1O70481 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ubr1O70481 AC122901.1-201ENSMUST00000214203 1790 ntBASIC21.45■■□□□ 1.02
Ubr1O70481 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ubr1O70481 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC21.45■■□□□ 1.02
Ubr1O70481 Gm27646-201ENSMUST00000183989 110 ntBASIC21.45■■□□□ 1.02
Ubr1O70481 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ubr1O70481 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC21.45■■□□□ 1.02
Ubr1O70481 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ubr1O70481 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ubr1O70481 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ubr1O70481 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC21.44■■□□□ 1.02
Ubr1O70481 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC21.44■■□□□ 1.02
Ubr1O70481 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC21.44■■□□□ 1.02
Ubr1O70481 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ubr1O70481 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC21.44■■□□□ 1.02
Ubr1O70481 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Ubr1O70481 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ubr1O70481 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ubr1O70481 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ubr1O70481 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Ubr1O70481 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ubr1O70481 Gm37811-201ENSMUST00000192416 2601 ntBASIC21.44■■□□□ 1.02
Ubr1O70481 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Ubr1O70481 Gm12260-201ENSMUST00000122447 411 ntBASIC21.43■■□□□ 1.02
Ubr1O70481 Gm25911-201ENSMUST00000157621 56 ntBASIC21.43■■□□□ 1.02
Ubr1O70481 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ubr1O70481 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ubr1O70481 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ubr1O70481 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC21.43■■□□□ 1.02
Ubr1O70481 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Ubr1O70481 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ubr1O70481 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ubr1O70481 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Ubr1O70481 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ubr1O70481 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ubr1O70481 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ubr1O70481 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ubr1O70481 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ubr1O70481 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ubr1O70481 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ubr1O70481 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Ubr1O70481 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ubr1O70481 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ubr1O70481 AC154222.1-201ENSMUST00000223882 475 ntBASIC21.43■■□□□ 1.02
Ubr1O70481 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ubr1O70481 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ubr1O70481 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC21.42■■□□□ 1.02
Ubr1O70481 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ubr1O70481 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ubr1O70481 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Ubr1O70481 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ubr1O70481 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ubr1O70481 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC21.42■■□□□ 1.02
Ubr1O70481 Gm25925-201ENSMUST00000158314 306 ntBASIC21.42■■□□□ 1.02
Ubr1O70481 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ubr1O70481 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ubr1O70481 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ubr1O70481 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ubr1O70481 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ubr1O70481 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ubr1O70481 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ubr1O70481 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ubr1O70481 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC21.42■■□□□ 1.02
Ubr1O70481 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ubr1O70481 Gm15743-202ENSMUST00000182690 1901 ntBASIC21.41■■□□□ 1.02
Ubr1O70481 Gm3928-201ENSMUST00000121141 1307 ntBASIC21.41■■□□□ 1.02
Ubr1O70481 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ubr1O70481 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ubr1O70481 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC21.41■■□□□ 1.02
Ubr1O70481 Gm14494-201ENSMUST00000118786 435 ntBASIC21.41■■□□□ 1.02
Ubr1O70481 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC21.41■■□□□ 1.02
Ubr1O70481 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ubr1O70481 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC21.41■■□□□ 1.02
Ubr1O70481 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ubr1O70481 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ubr1O70481 Gm27702-201ENSMUST00000184512 56 ntBASIC21.41■■□□□ 1.02
Ubr1O70481 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ubr1O70481 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ubr1O70481 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms