Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Pdlim1O70400 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim1O70400 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim1O70400 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim1O70400 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.37■□□□□ 0.21
Pdlim1O70400 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim1O70400 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.37■□□□□ 0.21
Pdlim1O70400 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim1O70400 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim1O70400 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pdlim1O70400 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim1O70400 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim1O70400 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim1O70400 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim1O70400 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim1O70400 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim1O70400 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim1O70400 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim1O70400 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim1O70400 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim1O70400 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim1O70400 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim1O70400 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim1O70400 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim1O70400 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pdlim1O70400 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdlim1O70400 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pdlim1O70400 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdlim1O70400 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdlim1O70400 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdlim1O70400 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdlim1O70400 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Pdlim1O70400 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdlim1O70400 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdlim1O70400 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdlim1O70400 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdlim1O70400 Mir770-201ENSMUST00000103252 94 ntBASIC16.36■□□□□ 0.21
Pdlim1O70400 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.36■□□□□ 0.21
Pdlim1O70400 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdlim1O70400 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdlim1O70400 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Pdlim1O70400 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdlim1O70400 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pdlim1O70400 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Pdlim1O70400 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdlim1O70400 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.36■□□□□ 0.21
Pdlim1O70400 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.36■□□□□ 0.21
Pdlim1O70400 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdlim1O70400 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pdlim1O70400 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Pdlim1O70400 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdlim1O70400 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdlim1O70400 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdlim1O70400 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdlim1O70400 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdlim1O70400 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.35■□□□□ 0.21
Pdlim1O70400 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdlim1O70400 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Pdlim1O70400 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdlim1O70400 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Pdlim1O70400 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.35■□□□□ 0.21
Pdlim1O70400 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.35■□□□□ 0.21
Pdlim1O70400 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdlim1O70400 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Pdlim1O70400 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdlim1O70400 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdlim1O70400 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Pdlim1O70400 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdlim1O70400 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pdlim1O70400 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdlim1O70400 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Pdlim1O70400 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdlim1O70400 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pdlim1O70400 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdlim1O70400 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdlim1O70400 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdlim1O70400 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pdlim1O70400 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pdlim1O70400 Gm6623-201ENSMUST00000173570 544 ntBASIC16.34■□□□□ 0.21
Pdlim1O70400 Gm6345-202ENSMUST00000180900 204 ntBASIC16.34■□□□□ 0.21
Pdlim1O70400 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdlim1O70400 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdlim1O70400 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.34■□□□□ 0.21
Pdlim1O70400 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pdlim1O70400 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdlim1O70400 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.34■□□□□ 0.21
Pdlim1O70400 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Pdlim1O70400 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdlim1O70400 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdlim1O70400 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pdlim1O70400 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pdlim1O70400 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Pdlim1O70400 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pdlim1O70400 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Pdlim1O70400 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Pdlim1O70400 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pdlim1O70400 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pdlim1O70400 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pdlim1O70400 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Pdlim1O70400 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms