Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pja1O55176 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pja1O55176 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pja1O55176 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pja1O55176 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pja1O55176 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.53■□□□□ 0.4
Pja1O55176 Gm18958-201ENSMUST00000174258 762 ntBASIC17.53■□□□□ 0.4
Pja1O55176 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.53■□□□□ 0.4
Pja1O55176 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.53■□□□□ 0.4
Pja1O55176 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Pja1O55176 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pja1O55176 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pja1O55176 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pja1O55176 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pja1O55176 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pja1O55176 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pja1O55176 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pja1O55176 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pja1O55176 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Pja1O55176 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pja1O55176 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pja1O55176 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pja1O55176 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pja1O55176 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pja1O55176 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.52■□□□□ 0.4
Pja1O55176 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pja1O55176 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.52■□□□□ 0.4
Pja1O55176 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pja1O55176 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pja1O55176 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pja1O55176 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pja1O55176 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pja1O55176 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pja1O55176 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pja1O55176 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pja1O55176 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pja1O55176 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pja1O55176 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.52■□□□□ 0.4
Pja1O55176 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pja1O55176 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pja1O55176 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pja1O55176 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pja1O55176 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Pja1O55176 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pja1O55176 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pja1O55176 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pja1O55176 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Pja1O55176 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pja1O55176 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pja1O55176 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.51■□□□□ 0.39
Pja1O55176 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pja1O55176 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.51■□□□□ 0.39
Pja1O55176 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.51■□□□□ 0.39
Pja1O55176 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pja1O55176 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pja1O55176 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pja1O55176 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pja1O55176 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pja1O55176 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pja1O55176 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pja1O55176 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pja1O55176 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Pja1O55176 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pja1O55176 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.51■□□□□ 0.39
Pja1O55176 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pja1O55176 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.51■□□□□ 0.39
Pja1O55176 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pja1O55176 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pja1O55176 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pja1O55176 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.51■□□□□ 0.39
Pja1O55176 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pja1O55176 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pja1O55176 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pja1O55176 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pja1O55176 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pja1O55176 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pja1O55176 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pja1O55176 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pja1O55176 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.5■□□□□ 0.39
Pja1O55176 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pja1O55176 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Pja1O55176 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Pja1O55176 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pja1O55176 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pja1O55176 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pja1O55176 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pja1O55176 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pja1O55176 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pja1O55176 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pja1O55176 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.49■□□□□ 0.39
Pja1O55176 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.49■□□□□ 0.39
Pja1O55176 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pja1O55176 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pja1O55176 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pja1O55176 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.49■□□□□ 0.39
Pja1O55176 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pja1O55176 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pja1O55176 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pja1O55176 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pja1O55176 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms