Protein–RNA interactions for Protein: O35638

Stag2, Cohesin subunit SA-2, mousemouse

Predictions only

Length 1,231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag2O35638 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Stag2O35638 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Stag2O35638 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Stag2O35638 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Stag2O35638 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Stag2O35638 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.97■□□□□ 0.63
Stag2O35638 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Stag2O35638 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Stag2O35638 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
Stag2O35638 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Stag2O35638 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Stag2O35638 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Stag2O35638 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Stag2O35638 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
Stag2O35638 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Stag2O35638 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Stag2O35638 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Stag2O35638 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Stag2O35638 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Stag2O35638 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Stag2O35638 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Stag2O35638 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Stag2O35638 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Stag2O35638 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Stag2O35638 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Stag2O35638 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Stag2O35638 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Stag2O35638 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Stag2O35638 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Stag2O35638 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Stag2O35638 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Stag2O35638 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Stag2O35638 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Stag2O35638 Gm17807-201ENSMUST00000186869 298 ntBASIC18.96■□□□□ 0.63
Stag2O35638 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Stag2O35638 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Stag2O35638 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Stag2O35638 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Stag2O35638 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Stag2O35638 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Stag2O35638 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Stag2O35638 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Stag2O35638 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Stag2O35638 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Stag2O35638 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Stag2O35638 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Stag2O35638 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Stag2O35638 Gm9103-201ENSMUST00000119371 405 ntBASIC18.95■□□□□ 0.62
Stag2O35638 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Stag2O35638 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.95■□□□□ 0.62
Stag2O35638 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.95■□□□□ 0.62
Stag2O35638 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Stag2O35638 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Stag2O35638 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Stag2O35638 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Stag2O35638 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.95■□□□□ 0.62
Stag2O35638 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Stag2O35638 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Stag2O35638 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stag2O35638 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.94■□□□□ 0.62
Stag2O35638 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stag2O35638 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stag2O35638 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Stag2O35638 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.94■□□□□ 0.62
Stag2O35638 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stag2O35638 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Stag2O35638 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.94■□□□□ 0.62
Stag2O35638 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stag2O35638 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.94■□□□□ 0.62
Stag2O35638 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Stag2O35638 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stag2O35638 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stag2O35638 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.94■□□□□ 0.62
Stag2O35638 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stag2O35638 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Stag2O35638 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stag2O35638 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stag2O35638 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stag2O35638 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stag2O35638 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.93■□□□□ 0.62
Stag2O35638 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.93■□□□□ 0.62
Stag2O35638 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.93■□□□□ 0.62
Stag2O35638 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stag2O35638 Mir3081-201ENSMUST00000175305 84 ntBASIC18.93■□□□□ 0.62
Stag2O35638 Gm27357-201ENSMUST00000183754 135 ntBASIC18.93■□□□□ 0.62
Stag2O35638 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stag2O35638 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stag2O35638 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stag2O35638 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stag2O35638 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stag2O35638 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Stag2O35638 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.92■□□□□ 0.62
Stag2O35638 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Stag2O35638 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Stag2O35638 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Stag2O35638 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Stag2O35638 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Stag2O35638 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Stag2O35638 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Stag2O35638 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms