Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Nr1i3O35627 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Nr1i3O35627 Phf7-203ENSMUST00000226565 1971 ntBASIC17.82■□□□□ 0.44
Nr1i3O35627 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nr1i3O35627 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nr1i3O35627 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nr1i3O35627 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nr1i3O35627 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.82■□□□□ 0.44
Nr1i3O35627 Gm22240-201ENSMUST00000175225 82 ntBASIC17.82■□□□□ 0.44
Nr1i3O35627 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Nr1i3O35627 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nr1i3O35627 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nr1i3O35627 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.82■□□□□ 0.44
Nr1i3O35627 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nr1i3O35627 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nr1i3O35627 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nr1i3O35627 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.82■□□□□ 0.44
Nr1i3O35627 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Nr1i3O35627 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1i3O35627 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.81■□□□□ 0.44
Nr1i3O35627 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1i3O35627 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1i3O35627 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.81■□□□□ 0.44
Nr1i3O35627 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.81■□□□□ 0.44
Nr1i3O35627 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Nr1i3O35627 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.81■□□□□ 0.44
Nr1i3O35627 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Nr1i3O35627 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Nr1i3O35627 Gm10812-201ENSMUST00000099864 546 ntBASIC17.81■□□□□ 0.44
Nr1i3O35627 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1i3O35627 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1i3O35627 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1i3O35627 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1i3O35627 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1i3O35627 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1i3O35627 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.8■□□□□ 0.44
Nr1i3O35627 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1i3O35627 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1i3O35627 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1i3O35627 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Nr1i3O35627 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Nr1i3O35627 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.8■□□□□ 0.44
Nr1i3O35627 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1i3O35627 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Nr1i3O35627 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1i3O35627 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1i3O35627 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.8■□□□□ 0.44
Nr1i3O35627 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.8■□□□□ 0.44
Nr1i3O35627 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1i3O35627 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1i3O35627 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.8■□□□□ 0.44
Nr1i3O35627 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1i3O35627 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1i3O35627 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1i3O35627 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1i3O35627 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.8■□□□□ 0.44
Nr1i3O35627 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1i3O35627 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.8■□□□□ 0.44
Nr1i3O35627 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.8■□□□□ 0.44
Nr1i3O35627 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1i3O35627 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1i3O35627 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Nr1i3O35627 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1i3O35627 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.79■□□□□ 0.44
Nr1i3O35627 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1i3O35627 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1i3O35627 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1i3O35627 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1i3O35627 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1i3O35627 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Nr1i3O35627 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.79■□□□□ 0.44
Nr1i3O35627 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.79■□□□□ 0.44
Nr1i3O35627 Gm44450-201ENSMUST00000199528 114 ntBASIC17.79■□□□□ 0.44
Nr1i3O35627 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.79■□□□□ 0.44
Nr1i3O35627 Gm7370-201ENSMUST00000219471 767 ntBASIC17.79■□□□□ 0.44
Nr1i3O35627 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1i3O35627 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Nr1i3O35627 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1i3O35627 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1i3O35627 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1i3O35627 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1i3O35627 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1i3O35627 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1i3O35627 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1i3O35627 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nr1i3O35627 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nr1i3O35627 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nr1i3O35627 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nr1i3O35627 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nr1i3O35627 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Nr1i3O35627 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nr1i3O35627 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Nr1i3O35627 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.78■□□□□ 0.44
Nr1i3O35627 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nr1i3O35627 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.78■□□□□ 0.44
Nr1i3O35627 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nr1i3O35627 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nr1i3O35627 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.78■□□□□ 0.44
Nr1i3O35627 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nr1i3O35627 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms