Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Npc1O35604 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Npc1O35604 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Npc1O35604 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Npc1O35604 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Npc1O35604 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Npc1O35604 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.19■□□□□ 0.18
Npc1O35604 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Npc1O35604 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Npc1O35604 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Npc1O35604 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.19■□□□□ 0.18
Npc1O35604 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.19■□□□□ 0.18
Npc1O35604 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Npc1O35604 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Npc1O35604 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Npc1O35604 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Npc1O35604 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Npc1O35604 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Npc1O35604 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Npc1O35604 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Npc1O35604 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Npc1O35604 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Npc1O35604 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.18■□□□□ 0.18
Npc1O35604 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Npc1O35604 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.18■□□□□ 0.18
Npc1O35604 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Npc1O35604 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Npc1O35604 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Npc1O35604 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Npc1O35604 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Npc1O35604 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Npc1O35604 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Npc1O35604 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Npc1O35604 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Npc1O35604 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Npc1O35604 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Npc1O35604 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Npc1O35604 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Npc1O35604 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Npc1O35604 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Npc1O35604 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Npc1O35604 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Npc1O35604 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.17■□□□□ 0.18
Npc1O35604 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.17■□□□□ 0.18
Npc1O35604 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Npc1O35604 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Npc1O35604 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Npc1O35604 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.17■□□□□ 0.18
Npc1O35604 Gm10566-201ENSMUST00000086739 996 ntBASIC16.17■□□□□ 0.18
Npc1O35604 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Npc1O35604 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Npc1O35604 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.17■□□□□ 0.18
Npc1O35604 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Npc1O35604 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Npc1O35604 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.17■□□□□ 0.18
Npc1O35604 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Npc1O35604 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Npc1O35604 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Npc1O35604 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Npc1O35604 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Npc1O35604 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Npc1O35604 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Npc1O35604 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Npc1O35604 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Npc1O35604 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Npc1O35604 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Npc1O35604 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Npc1O35604 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Npc1O35604 Gm13186-201ENSMUST00000118031 316 ntBASIC16.16■□□□□ 0.18
Npc1O35604 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Npc1O35604 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.16■□□□□ 0.18
Npc1O35604 Gm18115-201ENSMUST00000221209 621 ntBASIC16.16■□□□□ 0.18
Npc1O35604 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Npc1O35604 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Npc1O35604 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Npc1O35604 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
Npc1O35604 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Npc1O35604 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Npc1O35604 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Npc1O35604 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Npc1O35604 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Npc1O35604 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Npc1O35604 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Npc1O35604 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Npc1O35604 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Npc1O35604 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Npc1O35604 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Npc1O35604 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.15■□□□□ 0.18
Npc1O35604 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Npc1O35604 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Npc1O35604 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Npc1O35604 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Npc1O35604 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Npc1O35604 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Npc1O35604 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Npc1O35604 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.15■□□□□ 0.18
Npc1O35604 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Npc1O35604 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Npc1O35604 Gm37722-201ENSMUST00000193757 208 ntBASIC16.15■□□□□ 0.18
Npc1O35604 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms