Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prrt1O35449 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Prrt1O35449 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prrt1O35449 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Prrt1O35449 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prrt1O35449 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.09□□□□□ -0.15
Prrt1O35449 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prrt1O35449 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prrt1O35449 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.09□□□□□ -0.15
Prrt1O35449 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prrt1O35449 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prrt1O35449 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.08□□□□□ -0.15
Prrt1O35449 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.08□□□□□ -0.15
Prrt1O35449 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Prrt1O35449 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Prrt1O35449 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prrt1O35449 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prrt1O35449 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prrt1O35449 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prrt1O35449 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.08□□□□□ -0.16
Prrt1O35449 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.08□□□□□ -0.16
Prrt1O35449 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prrt1O35449 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prrt1O35449 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prrt1O35449 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Prrt1O35449 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prrt1O35449 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prrt1O35449 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prrt1O35449 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prrt1O35449 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Prrt1O35449 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.08□□□□□ -0.16
Prrt1O35449 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prrt1O35449 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prrt1O35449 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prrt1O35449 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Prrt1O35449 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prrt1O35449 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Prrt1O35449 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prrt1O35449 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prrt1O35449 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prrt1O35449 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prrt1O35449 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Prrt1O35449 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prrt1O35449 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prrt1O35449 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prrt1O35449 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prrt1O35449 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.07□□□□□ -0.16
Prrt1O35449 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.07□□□□□ -0.16
Prrt1O35449 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
Prrt1O35449 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prrt1O35449 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Prrt1O35449 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prrt1O35449 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Prrt1O35449 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Prrt1O35449 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prrt1O35449 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prrt1O35449 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prrt1O35449 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Prrt1O35449 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prrt1O35449 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prrt1O35449 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.07□□□□□ -0.16
Prrt1O35449 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prrt1O35449 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prrt1O35449 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Prrt1O35449 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Prrt1O35449 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Prrt1O35449 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.06□□□□□ -0.16
Prrt1O35449 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prrt1O35449 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prrt1O35449 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prrt1O35449 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prrt1O35449 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prrt1O35449 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Prrt1O35449 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.06□□□□□ -0.16
Prrt1O35449 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prrt1O35449 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Prrt1O35449 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Prrt1O35449 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Prrt1O35449 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prrt1O35449 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prrt1O35449 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prrt1O35449 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prrt1O35449 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prrt1O35449 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prrt1O35449 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prrt1O35449 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Prrt1O35449 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Prrt1O35449 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.05□□□□□ -0.16
Prrt1O35449 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prrt1O35449 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Prrt1O35449 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prrt1O35449 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prrt1O35449 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Prrt1O35449 Gm6576-201ENSMUST00000169678 883 ntBASIC14.05□□□□□ -0.16
Prrt1O35449 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prrt1O35449 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prrt1O35449 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prrt1O35449 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Prrt1O35449 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Prrt1O35449 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms