Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Tnfsf11O35235 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Tnfsf11O35235 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf11O35235 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf11O35235 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Tnfsf11O35235 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC12.99□□□□□ -0.33
Tnfsf11O35235 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf11O35235 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf11O35235 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf11O35235 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf11O35235 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf11O35235 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf11O35235 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf11O35235 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf11O35235 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf11O35235 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Tnfsf11O35235 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tnfsf11O35235 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.99□□□□□ -0.33
Tnfsf11O35235 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Tnfsf11O35235 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Tnfsf11O35235 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Tnfsf11O35235 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf11O35235 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Tnfsf11O35235 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf11O35235 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf11O35235 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf11O35235 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf11O35235 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf11O35235 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf11O35235 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf11O35235 Gm7290-201ENSMUST00000104990 617 ntBASIC12.98□□□□□ -0.33
Tnfsf11O35235 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf11O35235 Gm12918-201ENSMUST00000120234 636 ntBASIC12.98□□□□□ -0.33
Tnfsf11O35235 Gm15710-201ENSMUST00000121821 636 ntBASIC12.98□□□□□ -0.33
Tnfsf11O35235 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC12.98□□□□□ -0.33
Tnfsf11O35235 Gm5075-201ENSMUST00000196916 622 ntBASIC12.98□□□□□ -0.33
Tnfsf11O35235 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC12.98□□□□□ -0.33
Tnfsf11O35235 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC12.98□□□□□ -0.33
Tnfsf11O35235 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf11O35235 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf11O35235 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf11O35235 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf11O35235 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf11O35235 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf11O35235 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf11O35235 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf11O35235 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfsf11O35235 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf11O35235 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf11O35235 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf11O35235 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf11O35235 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf11O35235 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf11O35235 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Tnfsf11O35235 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf11O35235 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf11O35235 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Tnfsf11O35235 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Tnfsf11O35235 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf11O35235 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf11O35235 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Tnfsf11O35235 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf11O35235 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.97□□□□□ -0.33
Tnfsf11O35235 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf11O35235 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC12.97□□□□□ -0.33
Tnfsf11O35235 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfsf11O35235 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Tnfsf11O35235 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfsf11O35235 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfsf11O35235 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfsf11O35235 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC12.96□□□□□ -0.33
Tnfsf11O35235 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfsf11O35235 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Tnfsf11O35235 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfsf11O35235 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfsf11O35235 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfsf11O35235 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfsf11O35235 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Tnfsf11O35235 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfsf11O35235 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Tnfsf11O35235 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfsf11O35235 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfsf11O35235 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfsf11O35235 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfsf11O35235 Mir6349-201ENSMUST00000184059 97 ntBASIC12.96□□□□□ -0.33
Tnfsf11O35235 AC107711.5-202ENSMUST00000226429 702 ntBASIC12.96□□□□□ -0.33
Tnfsf11O35235 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfsf11O35235 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfsf11O35235 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfsf11O35235 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfsf11O35235 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfsf11O35235 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfsf11O35235 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Tnfsf11O35235 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC12.96□□□□□ -0.34
Tnfsf11O35235 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfsf11O35235 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfsf11O35235 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfsf11O35235 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
Tnfsf11O35235 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfsf11O35235 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms