Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cpsf2O35218 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cpsf2O35218 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cpsf2O35218 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cpsf2O35218 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cpsf2O35218 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cpsf2O35218 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cpsf2O35218 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf2O35218 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cpsf2O35218 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf2O35218 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf2O35218 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf2O35218 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf2O35218 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf2O35218 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf2O35218 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf2O35218 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf2O35218 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf2O35218 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.75■□□□□ 0.43
Cpsf2O35218 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Cpsf2O35218 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf2O35218 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf2O35218 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf2O35218 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf2O35218 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf2O35218 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf2O35218 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf2O35218 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf2O35218 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf2O35218 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf2O35218 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf2O35218 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf2O35218 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.74■□□□□ 0.43
Cpsf2O35218 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf2O35218 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.74■□□□□ 0.43
Cpsf2O35218 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.74■□□□□ 0.43
Cpsf2O35218 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.74■□□□□ 0.43
Cpsf2O35218 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.74■□□□□ 0.43
Cpsf2O35218 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf2O35218 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf2O35218 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf2O35218 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf2O35218 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf2O35218 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf2O35218 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf2O35218 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf2O35218 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf2O35218 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.74■□□□□ 0.43
Cpsf2O35218 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf2O35218 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf2O35218 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cpsf2O35218 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf2O35218 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Cpsf2O35218 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.73■□□□□ 0.43
Cpsf2O35218 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf2O35218 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf2O35218 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf2O35218 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.73■□□□□ 0.43
Cpsf2O35218 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Cpsf2O35218 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf2O35218 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf2O35218 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf2O35218 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.73■□□□□ 0.43
Cpsf2O35218 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.73■□□□□ 0.43
Cpsf2O35218 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf2O35218 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf2O35218 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf2O35218 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf2O35218 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cpsf2O35218 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf2O35218 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.73■□□□□ 0.43
Cpsf2O35218 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf2O35218 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf2O35218 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf2O35218 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf2O35218 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf2O35218 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf2O35218 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf2O35218 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf2O35218 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf2O35218 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf2O35218 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.72■□□□□ 0.43
Cpsf2O35218 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf2O35218 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Cpsf2O35218 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Cpsf2O35218 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.72■□□□□ 0.43
Cpsf2O35218 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Cpsf2O35218 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf2O35218 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf2O35218 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.72■□□□□ 0.43
Cpsf2O35218 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cpsf2O35218 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.72■□□□□ 0.43
Cpsf2O35218 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf2O35218 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf2O35218 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf2O35218 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf2O35218 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf2O35218 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf2O35218 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf2O35218 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms