Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC21.23■□□□□ 0.99
Col15a1O35206 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Col15a1O35206 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col15a1O35206 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col15a1O35206 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col15a1O35206 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Col15a1O35206 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Col15a1O35206 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col15a1O35206 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col15a1O35206 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col15a1O35206 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col15a1O35206 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Col15a1O35206 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col15a1O35206 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col15a1O35206 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col15a1O35206 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Col15a1O35206 Gm25406-201ENSMUST00000157599 105 ntBASIC21.22■□□□□ 0.99
Col15a1O35206 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
Col15a1O35206 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC21.22■□□□□ 0.99
Col15a1O35206 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC21.22■□□□□ 0.99
Col15a1O35206 AC154757.1-201ENSMUST00000228289 336 ntBASIC21.22■□□□□ 0.99
Col15a1O35206 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC21.22■□□□□ 0.99
Col15a1O35206 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC21.22■□□□□ 0.99
Col15a1O35206 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Col15a1O35206 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Col15a1O35206 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Col15a1O35206 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col15a1O35206 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col15a1O35206 AC131586.3-201ENSMUST00000228355 1367 ntBASIC21.21■□□□□ 0.99
Col15a1O35206 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Col15a1O35206 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col15a1O35206 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col15a1O35206 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col15a1O35206 Gm12260-201ENSMUST00000122447 411 ntBASIC21.21■□□□□ 0.99
Col15a1O35206 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Col15a1O35206 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col15a1O35206 Gm2213-201ENSMUST00000197485 688 ntBASIC21.21■□□□□ 0.99
Col15a1O35206 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC21.21■□□□□ 0.99
Col15a1O35206 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col15a1O35206 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col15a1O35206 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col15a1O35206 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Col15a1O35206 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col15a1O35206 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col15a1O35206 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col15a1O35206 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Col15a1O35206 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col15a1O35206 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col15a1O35206 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col15a1O35206 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC21.2■□□□□ 0.98
Col15a1O35206 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col15a1O35206 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Col15a1O35206 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Col15a1O35206 Gm9727-201ENSMUST00000161387 555 ntBASIC21.2■□□□□ 0.98
Col15a1O35206 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col15a1O35206 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Col15a1O35206 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col15a1O35206 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC21.2■□□□□ 0.98
Col15a1O35206 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col15a1O35206 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col15a1O35206 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Col15a1O35206 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col15a1O35206 Gm23935-201ENSMUST00000102303 57 ntBASIC21.19■□□□□ 0.98
Col15a1O35206 Gm24270-201ENSMUST00000102326 57 ntBASIC21.19■□□□□ 0.98
Col15a1O35206 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
Col15a1O35206 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col15a1O35206 Gm24245-201ENSMUST00000157318 57 ntBASIC21.19■□□□□ 0.98
Col15a1O35206 Gm8655-201ENSMUST00000221159 852 ntBASIC21.19■□□□□ 0.98
Col15a1O35206 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Col15a1O35206 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col15a1O35206 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Col15a1O35206 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col15a1O35206 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col15a1O35206 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col15a1O35206 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col15a1O35206 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Col15a1O35206 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC21.18■□□□□ 0.98
Col15a1O35206 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Col15a1O35206 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Col15a1O35206 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Col15a1O35206 AC084391.1-201ENSMUST00000200651 141 ntBASIC21.18■□□□□ 0.98
Col15a1O35206 Gm9172-201ENSMUST00000212092 954 ntBASIC21.18■□□□□ 0.98
Col15a1O35206 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col15a1O35206 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Col15a1O35206 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col15a1O35206 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col15a1O35206 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Col15a1O35206 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col15a1O35206 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Col15a1O35206 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col15a1O35206 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col15a1O35206 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col15a1O35206 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Col15a1O35206 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col15a1O35206 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col15a1O35206 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col15a1O35206 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col15a1O35206 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Col15a1O35206 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC21.17■□□□□ 0.98
Col15a1O35206 AC159106.1-201ENSMUST00000224421 690 ntBASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms