Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cx3cl1O35188 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.59■□□□□ 0.09
Cx3cl1O35188 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cx3cl1O35188 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cx3cl1O35188 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cx3cl1O35188 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cx3cl1O35188 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Cx3cl1O35188 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cx3cl1O35188 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Cx3cl1O35188 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Cx3cl1O35188 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cx3cl1O35188 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.59■□□□□ 0.09
Cx3cl1O35188 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cx3cl1O35188 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Cx3cl1O35188 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cx3cl1O35188 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Cx3cl1O35188 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.58■□□□□ 0.09
Cx3cl1O35188 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cx3cl1O35188 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cx3cl1O35188 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Cx3cl1O35188 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cx3cl1O35188 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Cx3cl1O35188 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cx3cl1O35188 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Cx3cl1O35188 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cx3cl1O35188 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cx3cl1O35188 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cx3cl1O35188 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cx3cl1O35188 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cx3cl1O35188 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.58■□□□□ 0.08
Cx3cl1O35188 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Cx3cl1O35188 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.58■□□□□ 0.08
Cx3cl1O35188 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cx3cl1O35188 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cx3cl1O35188 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cx3cl1O35188 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cx3cl1O35188 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cx3cl1O35188 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Cx3cl1O35188 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cx3cl1O35188 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cx3cl1O35188 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cx3cl1O35188 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cx3cl1O35188 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cx3cl1O35188 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.58■□□□□ 0.08
Cx3cl1O35188 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cx3cl1O35188 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cx3cl1O35188 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cx3cl1O35188 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cx3cl1O35188 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cx3cl1O35188 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cx3cl1O35188 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cx3cl1O35188 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Cx3cl1O35188 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.57■□□□□ 0.08
Cx3cl1O35188 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Cx3cl1O35188 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cx3cl1O35188 Gm23634-201ENSMUST00000175071 91 ntBASIC15.57■□□□□ 0.08
Cx3cl1O35188 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.57■□□□□ 0.08
Cx3cl1O35188 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.57■□□□□ 0.08
Cx3cl1O35188 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cx3cl1O35188 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cx3cl1O35188 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cx3cl1O35188 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.57■□□□□ 0.08
Cx3cl1O35188 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cx3cl1O35188 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.57■□□□□ 0.08
Cx3cl1O35188 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.57■□□□□ 0.08
Cx3cl1O35188 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cx3cl1O35188 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cx3cl1O35188 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cx3cl1O35188 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.57■□□□□ 0.08
Cx3cl1O35188 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cx3cl1O35188 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cx3cl1O35188 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Gm11355-201ENSMUST00000121120 306 ntBASIC15.56■□□□□ 0.08
Cx3cl1O35188 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cl1O35188 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.56■□□□□ 0.08
Cx3cl1O35188 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms