Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Hdac1O09106 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac1O09106 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac1O09106 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac1O09106 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac1O09106 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac1O09106 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac1O09106 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac1O09106 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.75■□□□□ 0.75
Hdac1O09106 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac1O09106 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac1O09106 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.75■□□□□ 0.75
Hdac1O09106 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac1O09106 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac1O09106 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac1O09106 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac1O09106 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac1O09106 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Hdac1O09106 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac1O09106 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac1O09106 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hdac1O09106 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Hdac1O09106 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hdac1O09106 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hdac1O09106 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hdac1O09106 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hdac1O09106 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC19.74■□□□□ 0.75
Hdac1O09106 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hdac1O09106 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.74■□□□□ 0.75
Hdac1O09106 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hdac1O09106 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hdac1O09106 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Hdac1O09106 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.74■□□□□ 0.75
Hdac1O09106 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hdac1O09106 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.74■□□□□ 0.75
Hdac1O09106 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hdac1O09106 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hdac1O09106 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hdac1O09106 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hdac1O09106 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hdac1O09106 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hdac1O09106 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hdac1O09106 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Hdac1O09106 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac1O09106 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Hdac1O09106 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Hdac1O09106 Actl10-202ENSMUST00000226583 1501 ntBASIC19.73■□□□□ 0.75
Hdac1O09106 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac1O09106 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac1O09106 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac1O09106 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Hdac1O09106 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.73■□□□□ 0.75
Hdac1O09106 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac1O09106 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac1O09106 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC19.73■□□□□ 0.75
Hdac1O09106 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac1O09106 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac1O09106 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac1O09106 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac1O09106 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac1O09106 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac1O09106 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac1O09106 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac1O09106 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac1O09106 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac1O09106 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.72■□□□□ 0.75
Hdac1O09106 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.72■□□□□ 0.75
Hdac1O09106 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Hdac1O09106 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac1O09106 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac1O09106 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac1O09106 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac1O09106 AC153526.5-201ENSMUST00000218661 2147 ntBASIC19.72■□□□□ 0.75
Hdac1O09106 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Hdac1O09106 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac1O09106 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.71■□□□□ 0.75
Hdac1O09106 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Hdac1O09106 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac1O09106 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Hdac1O09106 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac1O09106 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac1O09106 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac1O09106 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac1O09106 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac1O09106 Gm13186-201ENSMUST00000118031 316 ntBASIC19.71■□□□□ 0.75
Hdac1O09106 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.71■□□□□ 0.75
Hdac1O09106 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac1O09106 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Hdac1O09106 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac1O09106 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac1O09106 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Hdac1O09106 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.71■□□□□ 0.75
Hdac1O09106 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Hdac1O09106 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Hdac1O09106 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac1O09106 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac1O09106 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac1O09106 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac1O09106 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac1O09106 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms