Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Gm37856-201ENSMUST00000191634 999 ntBASIC17.05■□□□□ 0.32
Trove2O08848 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trove2O08848 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trove2O08848 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trove2O08848 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trove2O08848 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trove2O08848 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trove2O08848 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trove2O08848 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trove2O08848 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trove2O08848 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trove2O08848 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.04■□□□□ 0.32
Trove2O08848 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trove2O08848 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trove2O08848 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Trove2O08848 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trove2O08848 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trove2O08848 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Trove2O08848 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trove2O08848 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Trove2O08848 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Trove2O08848 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trove2O08848 Gm11643-201ENSMUST00000119578 864 ntBASIC17.04■□□□□ 0.32
Trove2O08848 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trove2O08848 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trove2O08848 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trove2O08848 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trove2O08848 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trove2O08848 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trove2O08848 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trove2O08848 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trove2O08848 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trove2O08848 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trove2O08848 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trove2O08848 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trove2O08848 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trove2O08848 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trove2O08848 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.03■□□□□ 0.32
Trove2O08848 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trove2O08848 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Trove2O08848 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trove2O08848 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trove2O08848 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.03■□□□□ 0.32
Trove2O08848 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trove2O08848 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Trove2O08848 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.03■□□□□ 0.32
Trove2O08848 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trove2O08848 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trove2O08848 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trove2O08848 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trove2O08848 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trove2O08848 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.03■□□□□ 0.32
Trove2O08848 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trove2O08848 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trove2O08848 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.02■□□□□ 0.32
Trove2O08848 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trove2O08848 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trove2O08848 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trove2O08848 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Trove2O08848 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trove2O08848 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trove2O08848 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trove2O08848 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trove2O08848 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trove2O08848 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.02■□□□□ 0.32
Trove2O08848 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trove2O08848 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Trove2O08848 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trove2O08848 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trove2O08848 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trove2O08848 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
Trove2O08848 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trove2O08848 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trove2O08848 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trove2O08848 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Trove2O08848 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trove2O08848 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trove2O08848 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trove2O08848 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trove2O08848 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trove2O08848 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.01■□□□□ 0.31
Trove2O08848 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trove2O08848 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trove2O08848 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trove2O08848 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.01■□□□□ 0.31
Trove2O08848 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trove2O08848 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Trove2O08848 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trove2O08848 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.01■□□□□ 0.31
Trove2O08848 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trove2O08848 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trove2O08848 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trove2O08848 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Trove2O08848 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trove2O08848 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trove2O08848 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.01■□□□□ 0.31
Trove2O08848 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trove2O08848 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.01■□□□□ 0.31
Trove2O08848 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trove2O08848 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms