Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.19■□□□□ 0.34
Ebf3O08791 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ebf3O08791 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ebf3O08791 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ebf3O08791 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.19■□□□□ 0.34
Ebf3O08791 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ebf3O08791 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ebf3O08791 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ebf3O08791 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ebf3O08791 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ebf3O08791 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Ebf3O08791 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ebf3O08791 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.19■□□□□ 0.34
Ebf3O08791 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.18■□□□□ 0.34
Ebf3O08791 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ebf3O08791 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ebf3O08791 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ebf3O08791 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ebf3O08791 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Ebf3O08791 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ebf3O08791 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ebf3O08791 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ebf3O08791 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Ebf3O08791 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ebf3O08791 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.18■□□□□ 0.34
Ebf3O08791 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
Ebf3O08791 Birc2-201ENSMUST00000054878 378 ntBASIC17.18■□□□□ 0.34
Ebf3O08791 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Ebf3O08791 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ebf3O08791 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ebf3O08791 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ebf3O08791 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ebf3O08791 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ebf3O08791 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ebf3O08791 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ebf3O08791 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.17■□□□□ 0.34
Ebf3O08791 Phf7-203ENSMUST00000226565 1971 ntBASIC17.17■□□□□ 0.34
Ebf3O08791 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.17■□□□□ 0.34
Ebf3O08791 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ebf3O08791 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ebf3O08791 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ebf3O08791 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ebf3O08791 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Ebf3O08791 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.17■□□□□ 0.34
Ebf3O08791 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.17■□□□□ 0.34
Ebf3O08791 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.17■□□□□ 0.34
Ebf3O08791 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ebf3O08791 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ebf3O08791 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ebf3O08791 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ebf3O08791 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.17■□□□□ 0.34
Ebf3O08791 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ebf3O08791 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ebf3O08791 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ebf3O08791 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ebf3O08791 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ebf3O08791 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ebf3O08791 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.16■□□□□ 0.34
Ebf3O08791 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ebf3O08791 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.16■□□□□ 0.34
Ebf3O08791 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ebf3O08791 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ebf3O08791 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ebf3O08791 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ebf3O08791 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ebf3O08791 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.16■□□□□ 0.34
Ebf3O08791 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ebf3O08791 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ebf3O08791 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ebf3O08791 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ebf3O08791 Gm13186-201ENSMUST00000118031 316 ntBASIC17.16■□□□□ 0.34
Ebf3O08791 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.16■□□□□ 0.34
Ebf3O08791 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ebf3O08791 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.16■□□□□ 0.34
Ebf3O08791 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.16■□□□□ 0.34
Ebf3O08791 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ebf3O08791 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.16■□□□□ 0.34
Ebf3O08791 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ebf3O08791 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ebf3O08791 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ebf3O08791 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Ebf3O08791 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ebf3O08791 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ebf3O08791 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ebf3O08791 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.16■□□□□ 0.34
Ebf3O08791 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ebf3O08791 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ebf3O08791 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ebf3O08791 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ebf3O08791 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ebf3O08791 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ebf3O08791 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ebf3O08791 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ebf3O08791 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ebf3O08791 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.15■□□□□ 0.34
Ebf3O08791 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Ebf3O08791 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ebf3O08791 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.15■□□□□ 0.34
Ebf3O08791 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.15■□□□□ 0.34
Ebf3O08791 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms