Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Raet1bO08603 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Raet1bO08603 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Raet1bO08603 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Raet1bO08603 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Raet1bO08603 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Raet1bO08603 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.7□□□□□ -0.06
Raet1bO08603 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Raet1bO08603 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Raet1bO08603 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Raet1bO08603 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Raet1bO08603 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Raet1bO08603 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Raet1bO08603 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Raet1bO08603 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Raet1bO08603 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Raet1bO08603 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Raet1bO08603 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Raet1bO08603 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Raet1bO08603 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Raet1bO08603 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Raet1bO08603 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Raet1bO08603 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Raet1bO08603 Mir5130-201ENSMUST00000175160 84 ntBASIC14.69□□□□□ -0.06
Raet1bO08603 Gm18959-201ENSMUST00000208954 655 ntBASIC14.69□□□□□ -0.06
Raet1bO08603 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Raet1bO08603 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Raet1bO08603 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Raet1bO08603 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Raet1bO08603 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Raet1bO08603 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Raet1bO08603 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Raet1bO08603 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Raet1bO08603 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Raet1bO08603 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Raet1bO08603 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Raet1bO08603 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Raet1bO08603 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Raet1bO08603 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Raet1bO08603 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Raet1bO08603 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Raet1bO08603 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Raet1bO08603 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Raet1bO08603 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Raet1bO08603 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Raet1bO08603 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Raet1bO08603 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Raet1bO08603 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Raet1bO08603 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Raet1bO08603 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Raet1bO08603 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Raet1bO08603 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.68□□□□□ -0.06
Raet1bO08603 Gm45058-201ENSMUST00000205810 766 ntBASIC14.68□□□□□ -0.06
Raet1bO08603 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.68□□□□□ -0.06
Raet1bO08603 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.68□□□□□ -0.06
Raet1bO08603 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Raet1bO08603 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Raet1bO08603 Gm10566-201ENSMUST00000086739 996 ntBASIC14.68□□□□□ -0.06
Raet1bO08603 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Raet1bO08603 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Raet1bO08603 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Raet1bO08603 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Raet1bO08603 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Raet1bO08603 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Raet1bO08603 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Raet1bO08603 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Raet1bO08603 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.67□□□□□ -0.06
Raet1bO08603 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Raet1bO08603 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Raet1bO08603 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Raet1bO08603 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Raet1bO08603 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Raet1bO08603 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Raet1bO08603 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Raet1bO08603 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Raet1bO08603 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.67□□□□□ -0.06
Raet1bO08603 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Raet1bO08603 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Raet1bO08603 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Raet1bO08603 Gm18115-201ENSMUST00000221209 621 ntBASIC14.67□□□□□ -0.06
Raet1bO08603 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Raet1bO08603 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Raet1bO08603 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Raet1bO08603 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Raet1bO08603 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Raet1bO08603 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Raet1bO08603 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Raet1bO08603 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Raet1bO08603 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Raet1bO08603 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Raet1bO08603 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Raet1bO08603 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Raet1bO08603 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Raet1bO08603 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Raet1bO08603 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Raet1bO08603 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Raet1bO08603 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Raet1bO08603 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Raet1bO08603 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Raet1bO08603 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms