Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Herc1E9PZP8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC9.29□□□□□ -0.92
Herc1E9PZP8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Herc1E9PZP8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Herc1E9PZP8 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Herc1E9PZP8 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Herc1E9PZP8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Herc1E9PZP8 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Herc1E9PZP8 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC9.29□□□□□ -0.92
Herc1E9PZP8 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Herc1E9PZP8 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Herc1E9PZP8 Gm5628-201ENSMUST00000222318 1049 ntBASIC9.29□□□□□ -0.92
Herc1E9PZP8 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Herc1E9PZP8 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Herc1E9PZP8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Herc1E9PZP8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Herc1E9PZP8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC9.29□□□□□ -0.92
Herc1E9PZP8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Herc1E9PZP8 Gm37153-201ENSMUST00000193637 231 ntBASIC9.29□□□□□ -0.92
Herc1E9PZP8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Herc1E9PZP8 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Herc1E9PZP8 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Herc1E9PZP8 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC9.29□□□□□ -0.92
Herc1E9PZP8 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Herc1E9PZP8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC9.29□□□□□ -0.92
Herc1E9PZP8 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Herc1E9PZP8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Herc1E9PZP8 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Gm9908-201ENSMUST00000211534 448 ntBASIC9.28□□□□□ -0.92
Herc1E9PZP8 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Gm16215-201ENSMUST00000161990 637 ntBASIC9.28□□□□□ -0.92
Herc1E9PZP8 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Gm45059-201ENSMUST00000205558 1077 ntBASIC9.28□□□□□ -0.92
Herc1E9PZP8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc1E9PZP8 AC154231.1-201ENSMUST00000220564 2175 ntBASIC9.28□□□□□ -0.92
Herc1E9PZP8 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Gm9115-201ENSMUST00000120192 1348 ntBASIC9.28□□□□□ -0.92
Herc1E9PZP8 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Herc1E9PZP8 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC9.28□□□□□ -0.92
Herc1E9PZP8 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Gm5784-201ENSMUST00000179344 2478 ntBASIC9.28□□□□□ -0.92
Herc1E9PZP8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc1E9PZP8 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Herc1E9PZP8 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Herc1E9PZP8 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Herc1E9PZP8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.92
Herc1E9PZP8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Herc1E9PZP8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Herc1E9PZP8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Herc1E9PZP8 Gm24158-201ENSMUST00000175263 71 ntBASIC9.27□□□□□ -0.93
Herc1E9PZP8 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Herc1E9PZP8 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Herc1E9PZP8 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Herc1E9PZP8 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Herc1E9PZP8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Herc1E9PZP8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Herc1E9PZP8 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Herc1E9PZP8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Herc1E9PZP8 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Herc1E9PZP8 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.93
Herc1E9PZP8 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC9.27□□□□□ -0.93
Herc1E9PZP8 Gm7488-201ENSMUST00000117148 684 ntBASIC9.27□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms