Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh17E9PXF0 Gm15794-201ENSMUST00000120182 631 ntBASIC15.42■□□□□ 0.06
Pcdh17E9PXF0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Pcdh17E9PXF0 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh17E9PXF0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh17E9PXF0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh17E9PXF0 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.42■□□□□ 0.06
Pcdh17E9PXF0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Pcdh17E9PXF0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh17E9PXF0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh17E9PXF0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Pcdh17E9PXF0 Phf7-203ENSMUST00000226565 1971 ntBASIC15.42■□□□□ 0.06
Pcdh17E9PXF0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh17E9PXF0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Pcdh17E9PXF0 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh17E9PXF0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh17E9PXF0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh17E9PXF0 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh17E9PXF0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Pcdh17E9PXF0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh17E9PXF0 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
Pcdh17E9PXF0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh17E9PXF0 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh17E9PXF0 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Pcdh17E9PXF0 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.41■□□□□ 0.06
Pcdh17E9PXF0 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Pcdh17E9PXF0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Pcdh17E9PXF0 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.41■□□□□ 0.06
Pcdh17E9PXF0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdh17E9PXF0 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh17E9PXF0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh17E9PXF0 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh17E9PXF0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh17E9PXF0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdh17E9PXF0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh17E9PXF0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Pcdh17E9PXF0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Pcdh17E9PXF0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh17E9PXF0 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
Pcdh17E9PXF0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh17E9PXF0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh17E9PXF0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh17E9PXF0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdh17E9PXF0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Pcdh17E9PXF0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh17E9PXF0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh17E9PXF0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh17E9PXF0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh17E9PXF0 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.4■□□□□ 0.06
Pcdh17E9PXF0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh17E9PXF0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.4■□□□□ 0.06
Pcdh17E9PXF0 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh17E9PXF0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh17E9PXF0 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Pcdh17E9PXF0 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Pcdh17E9PXF0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh17E9PXF0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.4■□□□□ 0.06
Pcdh17E9PXF0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Pcdh17E9PXF0 Gm18115-201ENSMUST00000221209 621 ntBASIC15.4■□□□□ 0.06
Pcdh17E9PXF0 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Pcdh17E9PXF0 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Pcdh17E9PXF0 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh17E9PXF0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Pcdh17E9PXF0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh17E9PXF0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh17E9PXF0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh17E9PXF0 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Pcdh17E9PXF0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh17E9PXF0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Pcdh17E9PXF0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Pcdh17E9PXF0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.39■□□□□ 0.05
Pcdh17E9PXF0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh17E9PXF0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh17E9PXF0 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh17E9PXF0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdh17E9PXF0 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Pcdh17E9PXF0 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh17E9PXF0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh17E9PXF0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh17E9PXF0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh17E9PXF0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Pcdh17E9PXF0 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh17E9PXF0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdh17E9PXF0 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh17E9PXF0 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdh17E9PXF0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh17E9PXF0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh17E9PXF0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh17E9PXF0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh17E9PXF0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.39■□□□□ 0.05
Pcdh17E9PXF0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Pcdh17E9PXF0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh17E9PXF0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh17E9PXF0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh17E9PXF0 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh17E9PXF0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh17E9PXF0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh17E9PXF0 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh17E9PXF0 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh17E9PXF0 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms