Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shank1D3YZU1 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shank1D3YZU1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shank1D3YZU1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shank1D3YZU1 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shank1D3YZU1 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shank1D3YZU1 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Shank1D3YZU1 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.81□□□□□ -0.04
Shank1D3YZU1 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Shank1D3YZU1 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.81□□□□□ -0.04
Shank1D3YZU1 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.81□□□□□ -0.04
Shank1D3YZU1 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.81□□□□□ -0.04
Shank1D3YZU1 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Shank1D3YZU1 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shank1D3YZU1 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.81□□□□□ -0.04
Shank1D3YZU1 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shank1D3YZU1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Shank1D3YZU1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shank1D3YZU1 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Shank1D3YZU1 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shank1D3YZU1 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shank1D3YZU1 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Shank1D3YZU1 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shank1D3YZU1 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shank1D3YZU1 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Shank1D3YZU1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shank1D3YZU1 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Shank1D3YZU1 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Shank1D3YZU1 Auts2-212ENSMUST00000178555 309 ntBASIC14.81□□□□□ -0.04
Shank1D3YZU1 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.81□□□□□ -0.04
Shank1D3YZU1 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shank1D3YZU1 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shank1D3YZU1 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shank1D3YZU1 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shank1D3YZU1 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shank1D3YZU1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shank1D3YZU1 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shank1D3YZU1 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shank1D3YZU1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.8□□□□□ -0.04
Shank1D3YZU1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shank1D3YZU1 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shank1D3YZU1 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Shank1D3YZU1 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.8□□□□□ -0.04
Shank1D3YZU1 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shank1D3YZU1 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.8□□□□□ -0.04
Shank1D3YZU1 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shank1D3YZU1 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Shank1D3YZU1 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Shank1D3YZU1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Shank1D3YZU1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shank1D3YZU1 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shank1D3YZU1 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shank1D3YZU1 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
Shank1D3YZU1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Shank1D3YZU1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shank1D3YZU1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shank1D3YZU1 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shank1D3YZU1 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Shank1D3YZU1 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Shank1D3YZU1 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shank1D3YZU1 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shank1D3YZU1 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shank1D3YZU1 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.8□□□□□ -0.04
Shank1D3YZU1 Gm13312-201ENSMUST00000119631 718 ntBASIC14.8□□□□□ -0.04
Shank1D3YZU1 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.8□□□□□ -0.04
Shank1D3YZU1 Gm14822-201ENSMUST00000122247 291 ntBASIC14.8□□□□□ -0.04
Shank1D3YZU1 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Shank1D3YZU1 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shank1D3YZU1 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.8□□□□□ -0.04
Shank1D3YZU1 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Shank1D3YZU1 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shank1D3YZU1 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Shank1D3YZU1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shank1D3YZU1 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shank1D3YZU1 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shank1D3YZU1 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shank1D3YZU1 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shank1D3YZU1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shank1D3YZU1 Gm14140-201ENSMUST00000119999 995 ntBASIC14.79□□□□□ -0.04
Shank1D3YZU1 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.79□□□□□ -0.04
Shank1D3YZU1 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.79□□□□□ -0.04
Shank1D3YZU1 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.79□□□□□ -0.04
Shank1D3YZU1 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shank1D3YZU1 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Shank1D3YZU1 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shank1D3YZU1 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.79□□□□□ -0.04
Shank1D3YZU1 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shank1D3YZU1 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.79□□□□□ -0.04
Shank1D3YZU1 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shank1D3YZU1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shank1D3YZU1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Shank1D3YZU1 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Shank1D3YZU1 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Shank1D3YZU1 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shank1D3YZU1 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Shank1D3YZU1 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.79□□□□□ -0.04
Shank1D3YZU1 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shank1D3YZU1 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shank1D3YZU1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shank1D3YZU1 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms