Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim30cD3YVI9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.16■□□□□ 0.5
Trim30cD3YVI9 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim30cD3YVI9 Gm15565-201ENSMUST00000118890 427 ntBASIC18.16■□□□□ 0.5
Trim30cD3YVI9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.16■□□□□ 0.5
Trim30cD3YVI9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim30cD3YVI9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim30cD3YVI9 Gm3375-201ENSMUST00000203929 796 ntBASIC18.16■□□□□ 0.5
Trim30cD3YVI9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.16■□□□□ 0.5
Trim30cD3YVI9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim30cD3YVI9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim30cD3YVI9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim30cD3YVI9 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Trim30cD3YVI9 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim30cD3YVI9 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Trim30cD3YVI9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim30cD3YVI9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.16■□□□□ 0.5
Trim30cD3YVI9 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim30cD3YVI9 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim30cD3YVI9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim30cD3YVI9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim30cD3YVI9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Trim30cD3YVI9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim30cD3YVI9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim30cD3YVI9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim30cD3YVI9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trim30cD3YVI9 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim30cD3YVI9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim30cD3YVI9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim30cD3YVI9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim30cD3YVI9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim30cD3YVI9 Gm12085-201ENSMUST00000119263 940 ntBASIC18.15■□□□□ 0.5
Trim30cD3YVI9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim30cD3YVI9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim30cD3YVI9 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim30cD3YVI9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trim30cD3YVI9 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim30cD3YVI9 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim30cD3YVI9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim30cD3YVI9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim30cD3YVI9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim30cD3YVI9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim30cD3YVI9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim30cD3YVI9 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim30cD3YVI9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim30cD3YVI9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim30cD3YVI9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trim30cD3YVI9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim30cD3YVI9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trim30cD3YVI9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trim30cD3YVI9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim30cD3YVI9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim30cD3YVI9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim30cD3YVI9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.14■□□□□ 0.49
Trim30cD3YVI9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim30cD3YVI9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim30cD3YVI9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.14■□□□□ 0.49
Trim30cD3YVI9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Trim30cD3YVI9 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim30cD3YVI9 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.14■□□□□ 0.49
Trim30cD3YVI9 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim30cD3YVI9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim30cD3YVI9 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Trim30cD3YVI9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim30cD3YVI9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim30cD3YVI9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim30cD3YVI9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim30cD3YVI9 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim30cD3YVI9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim30cD3YVI9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim30cD3YVI9 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim30cD3YVI9 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim30cD3YVI9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim30cD3YVI9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim30cD3YVI9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim30cD3YVI9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim30cD3YVI9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim30cD3YVI9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.13■□□□□ 0.49
Trim30cD3YVI9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.13■□□□□ 0.49
Trim30cD3YVI9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.13■□□□□ 0.49
Trim30cD3YVI9 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.13■□□□□ 0.49
Trim30cD3YVI9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim30cD3YVI9 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trim30cD3YVI9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim30cD3YVI9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim30cD3YVI9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Trim30cD3YVI9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim30cD3YVI9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC18.13■□□□□ 0.49
Trim30cD3YVI9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim30cD3YVI9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim30cD3YVI9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim30cD3YVI9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim30cD3YVI9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim30cD3YVI9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim30cD3YVI9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim30cD3YVI9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim30cD3YVI9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim30cD3YVI9 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim30cD3YVI9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim30cD3YVI9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms