Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
Syce3B5KM66 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Syce3B5KM66 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Syce3B5KM66 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Syce3B5KM66 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Syce3B5KM66 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Syce3B5KM66 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Syce3B5KM66 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
Syce3B5KM66 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Syce3B5KM66 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Syce3B5KM66 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.06■□□□□ 0.64
Syce3B5KM66 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.06■□□□□ 0.64
Syce3B5KM66 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.06■□□□□ 0.64
Syce3B5KM66 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.06■□□□□ 0.64
Syce3B5KM66 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Syce3B5KM66 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19.06■□□□□ 0.64
Syce3B5KM66 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Syce3B5KM66 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Syce3B5KM66 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syce3B5KM66 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syce3B5KM66 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syce3B5KM66 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syce3B5KM66 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syce3B5KM66 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
Syce3B5KM66 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syce3B5KM66 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Syce3B5KM66 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syce3B5KM66 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syce3B5KM66 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syce3B5KM66 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syce3B5KM66 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syce3B5KM66 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC19.05■□□□□ 0.64
Syce3B5KM66 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Syce3B5KM66 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Syce3B5KM66 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Syce3B5KM66 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Syce3B5KM66 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Syce3B5KM66 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Syce3B5KM66 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Syce3B5KM66 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Syce3B5KM66 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Syce3B5KM66 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Syce3B5KM66 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.04■□□□□ 0.64
Syce3B5KM66 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.04■□□□□ 0.64
Syce3B5KM66 Gm5408-201ENSMUST00000197998 747 ntBASIC19.04■□□□□ 0.64
Syce3B5KM66 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Syce3B5KM66 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Syce3B5KM66 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Syce3B5KM66 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Syce3B5KM66 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Syce3B5KM66 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Syce3B5KM66 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Syce3B5KM66 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Syce3B5KM66 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Syce3B5KM66 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Syce3B5KM66 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC19.03■□□□□ 0.64
Syce3B5KM66 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Syce3B5KM66 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Syce3B5KM66 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Syce3B5KM66 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.03■□□□□ 0.64
Syce3B5KM66 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC19.03■□□□□ 0.64
Syce3B5KM66 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Syce3B5KM66 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Syce3B5KM66 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Syce3B5KM66 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
Syce3B5KM66 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Syce3B5KM66 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Syce3B5KM66 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Syce3B5KM66 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC19.03■□□□□ 0.64
Syce3B5KM66 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Syce3B5KM66 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Syce3B5KM66 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Syce3B5KM66 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Syce3B5KM66 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Syce3B5KM66 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Syce3B5KM66 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Syce3B5KM66 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Syce3B5KM66 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
Syce3B5KM66 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Syce3B5KM66 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.02■□□□□ 0.64
Syce3B5KM66 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Syce3B5KM66 Gm5874-201ENSMUST00000096101 508 ntBASIC19.02■□□□□ 0.64
Syce3B5KM66 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Syce3B5KM66 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Syce3B5KM66 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Syce3B5KM66 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
Syce3B5KM66 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Syce3B5KM66 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Syce3B5KM66 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Syce3B5KM66 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Syce3B5KM66 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Syce3B5KM66 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Syce3B5KM66 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Syce3B5KM66 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Syce3B5KM66 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Syce3B5KM66 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Syce3B5KM66 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Syce3B5KM66 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Syce3B5KM66 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Syce3B5KM66 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms