Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Gm7506-201ENSMUST00000207758 815 ntBASIC19.2■□□□□ 0.66
Clrn2B2RVW2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clrn2B2RVW2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Clrn2B2RVW2 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Clrn2B2RVW2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clrn2B2RVW2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clrn2B2RVW2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Clrn2B2RVW2 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clrn2B2RVW2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.19■□□□□ 0.66
Clrn2B2RVW2 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
Clrn2B2RVW2 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Clrn2B2RVW2 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC19.19■□□□□ 0.66
Clrn2B2RVW2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Clrn2B2RVW2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.19■□□□□ 0.66
Clrn2B2RVW2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Clrn2B2RVW2 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clrn2B2RVW2 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clrn2B2RVW2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Clrn2B2RVW2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.19■□□□□ 0.66
Clrn2B2RVW2 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Clrn2B2RVW2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clrn2B2RVW2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clrn2B2RVW2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clrn2B2RVW2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clrn2B2RVW2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clrn2B2RVW2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.18■□□□□ 0.66
Clrn2B2RVW2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clrn2B2RVW2 Gm5364-201ENSMUST00000216789 889 ntBASIC19.18■□□□□ 0.66
Clrn2B2RVW2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clrn2B2RVW2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clrn2B2RVW2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clrn2B2RVW2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clrn2B2RVW2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clrn2B2RVW2 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clrn2B2RVW2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clrn2B2RVW2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.18■□□□□ 0.66
Clrn2B2RVW2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clrn2B2RVW2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clrn2B2RVW2 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.17■□□□□ 0.66
Clrn2B2RVW2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clrn2B2RVW2 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clrn2B2RVW2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clrn2B2RVW2 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.17■□□□□ 0.66
Clrn2B2RVW2 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clrn2B2RVW2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clrn2B2RVW2 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clrn2B2RVW2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clrn2B2RVW2 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.17■□□□□ 0.66
Clrn2B2RVW2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clrn2B2RVW2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Clrn2B2RVW2 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clrn2B2RVW2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Clrn2B2RVW2 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clrn2B2RVW2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Clrn2B2RVW2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clrn2B2RVW2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Clrn2B2RVW2 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.16■□□□□ 0.66
Clrn2B2RVW2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Clrn2B2RVW2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clrn2B2RVW2 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Clrn2B2RVW2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Clrn2B2RVW2 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.16■□□□□ 0.66
Clrn2B2RVW2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clrn2B2RVW2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.16■□□□□ 0.66
Clrn2B2RVW2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.16■□□□□ 0.66
Clrn2B2RVW2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC19.16■□□□□ 0.66
Clrn2B2RVW2 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clrn2B2RVW2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clrn2B2RVW2 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.16■□□□□ 0.66
Clrn2B2RVW2 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clrn2B2RVW2 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Clrn2B2RVW2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Clrn2B2RVW2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clrn2B2RVW2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clrn2B2RVW2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clrn2B2RVW2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Clrn2B2RVW2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clrn2B2RVW2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clrn2B2RVW2 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clrn2B2RVW2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
Clrn2B2RVW2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.15■□□□□ 0.66
Clrn2B2RVW2 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC19.15■□□□□ 0.66
Clrn2B2RVW2 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Clrn2B2RVW2 Gm13418-201ENSMUST00000119097 944 ntBASIC19.15■□□□□ 0.66
Clrn2B2RVW2 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clrn2B2RVW2 Mir5126-201ENSMUST00000175513 77 ntBASIC19.15■□□□□ 0.66
Clrn2B2RVW2 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC19.15■□□□□ 0.66
Clrn2B2RVW2 Gm8000-201ENSMUST00000188378 592 ntBASIC19.15■□□□□ 0.66
Clrn2B2RVW2 Gm43073-201ENSMUST00000198200 1189 ntBASIC19.15■□□□□ 0.66
Clrn2B2RVW2 Gm43332-201ENSMUST00000202511 1044 ntBASIC19.15■□□□□ 0.66
Clrn2B2RVW2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Clrn2B2RVW2 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clrn2B2RVW2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clrn2B2RVW2 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clrn2B2RVW2 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clrn2B2RVW2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Clrn2B2RVW2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Clrn2B2RVW2 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.66
Clrn2B2RVW2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Clrn2B2RVW2 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms