Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a5A6H584 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a5A6H584 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.49□□□□□ -0.41
Col6a5A6H584 Gm6912-201ENSMUST00000117218 544 ntBASIC12.49□□□□□ -0.41
Col6a5A6H584 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Col6a5A6H584 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.49□□□□□ -0.41
Col6a5A6H584 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.49□□□□□ -0.41
Col6a5A6H584 Gm43474-201ENSMUST00000196415 774 ntBASIC12.49□□□□□ -0.41
Col6a5A6H584 Gm9172-201ENSMUST00000212092 954 ntBASIC12.49□□□□□ -0.41
Col6a5A6H584 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a5A6H584 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.49□□□□□ -0.41
Col6a5A6H584 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a5A6H584 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.49□□□□□ -0.41
Col6a5A6H584 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a5A6H584 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Col6a5A6H584 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a5A6H584 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a5A6H584 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC12.48□□□□□ -0.41
Col6a5A6H584 Gm12490-201ENSMUST00000120255 560 ntBASIC12.48□□□□□ -0.41
Col6a5A6H584 Gm29707-201ENSMUST00000196325 491 ntBASIC12.48□□□□□ -0.41
Col6a5A6H584 Gm43433-201ENSMUST00000196573 481 ntBASIC12.48□□□□□ -0.41
Col6a5A6H584 Gm45612-201ENSMUST00000211320 160 ntBASIC12.48□□□□□ -0.41
Col6a5A6H584 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.48□□□□□ -0.41
Col6a5A6H584 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a5A6H584 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a5A6H584 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a5A6H584 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a5A6H584 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a5A6H584 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a5A6H584 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a5A6H584 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.48□□□□□ -0.41
Col6a5A6H584 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.48□□□□□ -0.41
Col6a5A6H584 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.48□□□□□ -0.41
Col6a5A6H584 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Col6a5A6H584 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a5A6H584 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a5A6H584 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a5A6H584 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a5A6H584 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a5A6H584 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a5A6H584 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a5A6H584 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Col6a5A6H584 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a5A6H584 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a5A6H584 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a5A6H584 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a5A6H584 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a5A6H584 Gm17968-201ENSMUST00000194902 784 ntBASIC12.47□□□□□ -0.41
Col6a5A6H584 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.47□□□□□ -0.41
Col6a5A6H584 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a5A6H584 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a5A6H584 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a5A6H584 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a5A6H584 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a5A6H584 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a5A6H584 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a5A6H584 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a5A6H584 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a5A6H584 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a5A6H584 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a5A6H584 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a5A6H584 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Col6a5A6H584 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a5A6H584 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.47□□□□□ -0.41
Col6a5A6H584 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a5A6H584 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a5A6H584 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.47□□□□□ -0.41
Col6a5A6H584 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.47□□□□□ -0.41
Col6a5A6H584 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Col6a5A6H584 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.47□□□□□ -0.41
Col6a5A6H584 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.47□□□□□ -0.41
Col6a5A6H584 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a5A6H584 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a5A6H584 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a5A6H584 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Col6a5A6H584 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.46□□□□□ -0.41
Col6a5A6H584 Gm13597-201ENSMUST00000121239 375 ntBASIC12.46□□□□□ -0.41
Col6a5A6H584 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col6a5A6H584 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col6a5A6H584 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.46□□□□□ -0.41
Col6a5A6H584 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col6a5A6H584 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Col6a5A6H584 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Col6a5A6H584 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col6a5A6H584 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col6a5A6H584 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col6a5A6H584 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col6a5A6H584 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.46□□□□□ -0.42
Col6a5A6H584 Gm44719-201ENSMUST00000206404 149 ntBASIC12.46□□□□□ -0.42
Col6a5A6H584 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col6a5A6H584 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col6a5A6H584 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col6a5A6H584 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col6a5A6H584 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Col6a5A6H584 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a5A6H584 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a5A6H584 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col6a5A6H584 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.45□□□□□ -0.42
Col6a5A6H584 Mir6420-201ENSMUST00000185032 102 ntBASIC12.45□□□□□ -0.42
Col6a5A6H584 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms