Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scn1aA2APX8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn1aA2APX8 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn1aA2APX8 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Scn1aA2APX8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scn1aA2APX8 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
Scn1aA2APX8 Gm7153-201ENSMUST00000117092 455 ntBASIC17.33■□□□□ 0.37
Scn1aA2APX8 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.37
Scn1aA2APX8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scn1aA2APX8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scn1aA2APX8 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.33■□□□□ 0.37
Scn1aA2APX8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
Scn1aA2APX8 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scn1aA2APX8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Scn1aA2APX8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.33■□□□□ 0.36
Scn1aA2APX8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.33■□□□□ 0.36
Scn1aA2APX8 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Scn1aA2APX8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn1aA2APX8 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn1aA2APX8 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Scn1aA2APX8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn1aA2APX8 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Scn1aA2APX8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn1aA2APX8 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn1aA2APX8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn1aA2APX8 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn1aA2APX8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn1aA2APX8 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.33■□□□□ 0.36
Scn1aA2APX8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn1aA2APX8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn1aA2APX8 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Scn1aA2APX8 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.32■□□□□ 0.36
Scn1aA2APX8 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn1aA2APX8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn1aA2APX8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn1aA2APX8 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scn1aA2APX8 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn1aA2APX8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn1aA2APX8 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Scn1aA2APX8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Scn1aA2APX8 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.32■□□□□ 0.36
Scn1aA2APX8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn1aA2APX8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn1aA2APX8 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn1aA2APX8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn1aA2APX8 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scn1aA2APX8 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.31■□□□□ 0.36
Scn1aA2APX8 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn1aA2APX8 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn1aA2APX8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scn1aA2APX8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn1aA2APX8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.31■□□□□ 0.36
Scn1aA2APX8 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn1aA2APX8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn1aA2APX8 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn1aA2APX8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn1aA2APX8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Scn1aA2APX8 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Scn1aA2APX8 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn1aA2APX8 Gm27459-201ENSMUST00000184860 107 ntBASIC17.31■□□□□ 0.36
Scn1aA2APX8 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.31■□□□□ 0.36
Scn1aA2APX8 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scn1aA2APX8 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.31■□□□□ 0.36
Scn1aA2APX8 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn1aA2APX8 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scn1aA2APX8 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn1aA2APX8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn1aA2APX8 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scn1aA2APX8 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn1aA2APX8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn1aA2APX8 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn1aA2APX8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn1aA2APX8 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn1aA2APX8 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn1aA2APX8 Gm15372-201ENSMUST00000120729 834 ntBASIC17.3■□□□□ 0.36
Scn1aA2APX8 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn1aA2APX8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn1aA2APX8 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn1aA2APX8 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn1aA2APX8 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Scn1aA2APX8 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn1aA2APX8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scn1aA2APX8 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.3■□□□□ 0.36
Scn1aA2APX8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Scn1aA2APX8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.3■□□□□ 0.36
Scn1aA2APX8 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scn1aA2APX8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Scn1aA2APX8 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.3■□□□□ 0.36
Scn1aA2APX8 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scn1aA2APX8 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.3■□□□□ 0.36
Scn1aA2APX8 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.3■□□□□ 0.36
Scn1aA2APX8 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn1aA2APX8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn1aA2APX8 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn1aA2APX8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn1aA2APX8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn1aA2APX8 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn1aA2APX8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn1aA2APX8 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn1aA2APX8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms