Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC11.41□□□□□ -0.58
Trav9d-4A0A0G2JG37 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9d-4A0A0G2JG37 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC11.41□□□□□ -0.58
Trav9d-4A0A0G2JG37 Gm10033-202ENSMUST00000211874 928 ntBASIC11.41□□□□□ -0.58
Trav9d-4A0A0G2JG37 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9d-4A0A0G2JG37 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav9d-4A0A0G2JG37 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9d-4A0A0G2JG37 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9d-4A0A0G2JG37 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9d-4A0A0G2JG37 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9d-4A0A0G2JG37 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9d-4A0A0G2JG37 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav9d-4A0A0G2JG37 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9d-4A0A0G2JG37 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-4A0A0G2JG37 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav9d-4A0A0G2JG37 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-4A0A0G2JG37 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-4A0A0G2JG37 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
Trav9d-4A0A0G2JG37 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-4A0A0G2JG37 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-4A0A0G2JG37 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-4A0A0G2JG37 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-4A0A0G2JG37 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-4A0A0G2JG37 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-4A0A0G2JG37 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-4A0A0G2JG37 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-4A0A0G2JG37 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-4A0A0G2JG37 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC11.4□□□□□ -0.58
Trav9d-4A0A0G2JG37 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-4A0A0G2JG37 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-4A0A0G2JG37 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-4A0A0G2JG37 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-4A0A0G2JG37 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC11.4□□□□□ -0.58
Trav9d-4A0A0G2JG37 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-4A0A0G2JG37 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trav9d-4A0A0G2JG37 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-4A0A0G2JG37 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Trav9d-4A0A0G2JG37 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-4A0A0G2JG37 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9d-4A0A0G2JG37 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Trav9d-4A0A0G2JG37 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trav9d-4A0A0G2JG37 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav9d-4A0A0G2JG37 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav9d-4A0A0G2JG37 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Trav9d-4A0A0G2JG37 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Trav9d-4A0A0G2JG37 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Trav9d-4A0A0G2JG37 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 AV356131-201ENSMUST00000206201 750 ntBASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 Tfap2a-209ENSMUST00000225180 1828 ntBASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav9d-4A0A0G2JG37 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9d-4A0A0G2JG37 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9d-4A0A0G2JG37 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav9d-4A0A0G2JG37 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9d-4A0A0G2JG37 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9d-4A0A0G2JG37 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9d-4A0A0G2JG37 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9d-4A0A0G2JG37 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav9d-4A0A0G2JG37 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9d-4A0A0G2JG37 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9d-4A0A0G2JG37 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9d-4A0A0G2JG37 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9d-4A0A0G2JG37 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav9d-4A0A0G2JG37 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9d-4A0A0G2JG37 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav9d-4A0A0G2JG37 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav9d-4A0A0G2JG37 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms