Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13n-4A0A0G2JG01 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Trav13n-4A0A0G2JG01 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13n-4A0A0G2JG01 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.49□□□□□ -0.25
Trav13n-4A0A0G2JG01 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.49□□□□□ -0.25
Trav13n-4A0A0G2JG01 Gm2274-201ENSMUST00000184539 609 ntBASIC13.49□□□□□ -0.25
Trav13n-4A0A0G2JG01 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Trav13n-4A0A0G2JG01 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.49□□□□□ -0.25
Trav13n-4A0A0G2JG01 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.49□□□□□ -0.25
Trav13n-4A0A0G2JG01 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.49□□□□□ -0.25
Trav13n-4A0A0G2JG01 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13n-4A0A0G2JG01 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13n-4A0A0G2JG01 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13n-4A0A0G2JG01 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13n-4A0A0G2JG01 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav13n-4A0A0G2JG01 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13n-4A0A0G2JG01 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13n-4A0A0G2JG01 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13n-4A0A0G2JG01 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav13n-4A0A0G2JG01 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Trav13n-4A0A0G2JG01 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav13n-4A0A0G2JG01 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13n-4A0A0G2JG01 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13n-4A0A0G2JG01 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13n-4A0A0G2JG01 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13n-4A0A0G2JG01 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav13n-4A0A0G2JG01 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC13.48□□□□□ -0.25
Trav13n-4A0A0G2JG01 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Trav13n-4A0A0G2JG01 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.48□□□□□ -0.25
Trav13n-4A0A0G2JG01 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13n-4A0A0G2JG01 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13n-4A0A0G2JG01 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav13n-4A0A0G2JG01 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13n-4A0A0G2JG01 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav13n-4A0A0G2JG01 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav13n-4A0A0G2JG01 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav13n-4A0A0G2JG01 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13n-4A0A0G2JG01 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13n-4A0A0G2JG01 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav13n-4A0A0G2JG01 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav13n-4A0A0G2JG01 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Gm18101-201ENSMUST00000215769 548 ntBASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav13n-4A0A0G2JG01 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13n-4A0A0G2JG01 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13n-4A0A0G2JG01 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13n-4A0A0G2JG01 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13n-4A0A0G2JG01 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13n-4A0A0G2JG01 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13n-4A0A0G2JG01 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13n-4A0A0G2JG01 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13n-4A0A0G2JG01 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13n-4A0A0G2JG01 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13n-4A0A0G2JG01 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13n-4A0A0G2JG01 Gm14859-201ENSMUST00000117752 357 ntBASIC13.46□□□□□ -0.25
Trav13n-4A0A0G2JG01 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13n-4A0A0G2JG01 Gm38027-201ENSMUST00000192315 235 ntBASIC13.46□□□□□ -0.25
Trav13n-4A0A0G2JG01 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.46□□□□□ -0.25
Trav13n-4A0A0G2JG01 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13n-4A0A0G2JG01 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13n-4A0A0G2JG01 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13n-4A0A0G2JG01 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav13n-4A0A0G2JG01 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.46□□□□□ -0.25
Trav13n-4A0A0G2JG01 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav13n-4A0A0G2JG01 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms