Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC11.46□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC11.46□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Gm4974-201ENSMUST00000209974 875 ntBASIC11.46□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Gm18025-201ENSMUST00000221733 862 ntBASIC11.46□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-4A0A0G2JFX3 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav13d-4A0A0G2JFX3 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC11.46□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC11.46□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Gm12382-201ENSMUST00000122005 922 ntBASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC11.44□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Gm27275-201ENSMUST00000184318 272 ntBASIC11.44□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Gm10517-202ENSMUST00000192970 758 ntBASIC11.44□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms