Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Gm42642-201ENSMUST00000200683 355 ntBASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 AC140264.2-202ENSMUST00000218746 817 ntBASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Gm29791-202ENSMUST00000207888 369 ntBASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.58□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Gm2399-201ENSMUST00000104944 225 ntBASIC12.58□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC12.58□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC12.58□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav3n-3A0A0G2JEM0 AV356131-201ENSMUST00000206201 750 ntBASIC12.58□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms