Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.47□□□□□ -0.41
Trav9-4A0A0B4J1K2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-4A0A0B4J1K2 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-4A0A0B4J1K2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-4A0A0B4J1K2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-4A0A0B4J1K2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav9-4A0A0B4J1K2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav9-4A0A0B4J1K2 Mir1668-201ENSMUST00000184114 107 ntBASIC12.47□□□□□ -0.41
Trav9-4A0A0B4J1K2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav9-4A0A0B4J1K2 AC107711.5-202ENSMUST00000226429 702 ntBASIC12.47□□□□□ -0.41
Trav9-4A0A0B4J1K2 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.47□□□□□ -0.41
Trav9-4A0A0B4J1K2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-4A0A0B4J1K2 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-4A0A0B4J1K2 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-4A0A0B4J1K2 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-4A0A0B4J1K2 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Trav9-4A0A0B4J1K2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-4A0A0B4J1K2 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-4A0A0B4J1K2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-4A0A0B4J1K2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-4A0A0B4J1K2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9-4A0A0B4J1K2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9-4A0A0B4J1K2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9-4A0A0B4J1K2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav9-4A0A0B4J1K2 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.46□□□□□ -0.41
Trav9-4A0A0B4J1K2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9-4A0A0B4J1K2 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9-4A0A0B4J1K2 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9-4A0A0B4J1K2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9-4A0A0B4J1K2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9-4A0A0B4J1K2 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9-4A0A0B4J1K2 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9-4A0A0B4J1K2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.46□□□□□ -0.41
Trav9-4A0A0B4J1K2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.46□□□□□ -0.41
Trav9-4A0A0B4J1K2 Gm27389-201ENSMUST00000183622 195 ntBASIC12.46□□□□□ -0.41
Trav9-4A0A0B4J1K2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav9-4A0A0B4J1K2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9-4A0A0B4J1K2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav9-4A0A0B4J1K2 Phf7-203ENSMUST00000226565 1971 ntBASIC12.46□□□□□ -0.41
Trav9-4A0A0B4J1K2 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav9-4A0A0B4J1K2 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9-4A0A0B4J1K2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9-4A0A0B4J1K2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9-4A0A0B4J1K2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9-4A0A0B4J1K2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.42
Trav9-4A0A0B4J1K2 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9-4A0A0B4J1K2 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9-4A0A0B4J1K2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9-4A0A0B4J1K2 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9-4A0A0B4J1K2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9-4A0A0B4J1K2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9-4A0A0B4J1K2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9-4A0A0B4J1K2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9-4A0A0B4J1K2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.45□□□□□ -0.42
Trav9-4A0A0B4J1K2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9-4A0A0B4J1K2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav9-4A0A0B4J1K2 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Trav9-4A0A0B4J1K2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9-4A0A0B4J1K2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9-4A0A0B4J1K2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.45□□□□□ -0.42
Trav9-4A0A0B4J1K2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav9-4A0A0B4J1K2 Gm26039-201ENSMUST00000158152 144 ntBASIC12.45□□□□□ -0.42
Trav9-4A0A0B4J1K2 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.45□□□□□ -0.42
Trav9-4A0A0B4J1K2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Trav9-4A0A0B4J1K2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9-4A0A0B4J1K2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9-4A0A0B4J1K2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9-4A0A0B4J1K2 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9-4A0A0B4J1K2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9-4A0A0B4J1K2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9-4A0A0B4J1K2 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9-4A0A0B4J1K2 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9-4A0A0B4J1K2 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.45□□□□□ -0.42
Trav9-4A0A0B4J1K2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav9-4A0A0B4J1K2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav9-4A0A0B4J1K2 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav9-4A0A0B4J1K2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9-4A0A0B4J1K2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9-4A0A0B4J1K2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9-4A0A0B4J1K2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9-4A0A0B4J1K2 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9-4A0A0B4J1K2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav9-4A0A0B4J1K2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav9-4A0A0B4J1K2 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Trav9-4A0A0B4J1K2 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9-4A0A0B4J1K2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9-4A0A0B4J1K2 Gm13186-201ENSMUST00000118031 316 ntBASIC12.44□□□□□ -0.42
Trav9-4A0A0B4J1K2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav9-4A0A0B4J1K2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.44□□□□□ -0.42
Trav9-4A0A0B4J1K2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav9-4A0A0B4J1K2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9-4A0A0B4J1K2 Gm21559-201ENSMUST00000220638 855 ntBASIC12.44□□□□□ -0.42
Trav9-4A0A0B4J1K2 Gm18032-201ENSMUST00000222541 538 ntBASIC12.44□□□□□ -0.42
Trav9-4A0A0B4J1K2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9-4A0A0B4J1K2 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9-4A0A0B4J1K2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
Trav9-4A0A0B4J1K2 Gm8587-201ENSMUST00000076538 843 ntBASIC12.44□□□□□ -0.42
Trav9-4A0A0B4J1K2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav9-4A0A0B4J1K2 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9-4A0A0B4J1K2 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms