Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv3A0A0A6YYE2 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv3A0A0A6YYE2 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC12.84□□□□□ -0.35
Trbv3A0A0A6YYE2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Trbv3A0A0A6YYE2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Trbv3A0A0A6YYE2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv3A0A0A6YYE2 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv3A0A0A6YYE2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC12.84□□□□□ -0.35
Trbv3A0A0A6YYE2 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv3A0A0A6YYE2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv3A0A0A6YYE2 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Trbv3A0A0A6YYE2 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv3A0A0A6YYE2 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv3A0A0A6YYE2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.84□□□□□ -0.35
Trbv3A0A0A6YYE2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv3A0A0A6YYE2 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv3A0A0A6YYE2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv3A0A0A6YYE2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv3A0A0A6YYE2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv3A0A0A6YYE2 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv3A0A0A6YYE2 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv3A0A0A6YYE2 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Trbv3A0A0A6YYE2 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trbv3A0A0A6YYE2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.83□□□□□ -0.35
Trbv3A0A0A6YYE2 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trbv3A0A0A6YYE2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv3A0A0A6YYE2 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv3A0A0A6YYE2 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv3A0A0A6YYE2 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Trbv3A0A0A6YYE2 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv3A0A0A6YYE2 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv3A0A0A6YYE2 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trbv3A0A0A6YYE2 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv3A0A0A6YYE2 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv3A0A0A6YYE2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv3A0A0A6YYE2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trbv3A0A0A6YYE2 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv3A0A0A6YYE2 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trbv3A0A0A6YYE2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12.83□□□□□ -0.36
Trbv3A0A0A6YYE2 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv3A0A0A6YYE2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv3A0A0A6YYE2 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trbv3A0A0A6YYE2 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv3A0A0A6YYE2 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv3A0A0A6YYE2 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Trbv3A0A0A6YYE2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv3A0A0A6YYE2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.83□□□□□ -0.36
Trbv3A0A0A6YYE2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv3A0A0A6YYE2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv3A0A0A6YYE2 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv3A0A0A6YYE2 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv3A0A0A6YYE2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv3A0A0A6YYE2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv3A0A0A6YYE2 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv3A0A0A6YYE2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv3A0A0A6YYE2 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv3A0A0A6YYE2 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv3A0A0A6YYE2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv3A0A0A6YYE2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv3A0A0A6YYE2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trbv3A0A0A6YYE2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.82□□□□□ -0.36
Trbv3A0A0A6YYE2 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC12.82□□□□□ -0.36
Trbv3A0A0A6YYE2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC12.82□□□□□ -0.36
Trbv3A0A0A6YYE2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv3A0A0A6YYE2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv3A0A0A6YYE2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv3A0A0A6YYE2 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv3A0A0A6YYE2 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trbv3A0A0A6YYE2 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Trbv3A0A0A6YYE2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv3A0A0A6YYE2 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv3A0A0A6YYE2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv3A0A0A6YYE2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv3A0A0A6YYE2 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv3A0A0A6YYE2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC12.81□□□□□ -0.36
Trbv3A0A0A6YYE2 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv3A0A0A6YYE2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv3A0A0A6YYE2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv3A0A0A6YYE2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv3A0A0A6YYE2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv3A0A0A6YYE2 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv3A0A0A6YYE2 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv3A0A0A6YYE2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv3A0A0A6YYE2 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trbv3A0A0A6YYE2 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv3A0A0A6YYE2 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Trbv3A0A0A6YYE2 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv3A0A0A6YYE2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.81□□□□□ -0.36
Trbv3A0A0A6YYE2 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv3A0A0A6YYE2 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv3A0A0A6YYE2 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv3A0A0A6YYE2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv3A0A0A6YYE2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trbv3A0A0A6YYE2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Trbv3A0A0A6YYE2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv3A0A0A6YYE2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Trbv3A0A0A6YYE2 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Trbv3A0A0A6YYE2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv3A0A0A6YYE2 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv3A0A0A6YYE2 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms