Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ighv1-47A0A0A6YY41 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Ighv1-47A0A0A6YY41 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.71□□□□□ -0.21
Ighv1-47A0A0A6YY41 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC13.71□□□□□ -0.21
Ighv1-47A0A0A6YY41 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ighv1-47A0A0A6YY41 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Ighv1-47A0A0A6YY41 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.71□□□□□ -0.21
Ighv1-47A0A0A6YY41 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.71□□□□□ -0.21
Ighv1-47A0A0A6YY41 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ighv1-47A0A0A6YY41 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.71□□□□□ -0.21
Ighv1-47A0A0A6YY41 Il3ra-202ENSMUST00000223589 738 ntBASIC13.71□□□□□ -0.21
Ighv1-47A0A0A6YY41 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.71□□□□□ -0.21
Ighv1-47A0A0A6YY41 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ighv1-47A0A0A6YY41 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ighv1-47A0A0A6YY41 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ighv1-47A0A0A6YY41 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Ighv1-47A0A0A6YY41 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ighv1-47A0A0A6YY41 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ighv1-47A0A0A6YY41 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ighv1-47A0A0A6YY41 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ighv1-47A0A0A6YY41 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ighv1-47A0A0A6YY41 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ighv1-47A0A0A6YY41 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ighv1-47A0A0A6YY41 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ighv1-47A0A0A6YY41 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ighv1-47A0A0A6YY41 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ighv1-47A0A0A6YY41 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Mir5122-201ENSMUST00000175004 89 ntBASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Gm21814-202ENSMUST00000203277 873 ntBASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Gm3375-201ENSMUST00000203929 796 ntBASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ighv1-47A0A0A6YY41 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-47A0A0A6YY41 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-47A0A0A6YY41 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-47A0A0A6YY41 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-47A0A0A6YY41 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ighv1-47A0A0A6YY41 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-47A0A0A6YY41 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-47A0A0A6YY41 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-47A0A0A6YY41 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-47A0A0A6YY41 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-47A0A0A6YY41 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-47A0A0A6YY41 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-47A0A0A6YY41 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.69□□□□□ -0.22
Ighv1-47A0A0A6YY41 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-47A0A0A6YY41 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-47A0A0A6YY41 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-47A0A0A6YY41 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.69□□□□□ -0.22
Ighv1-47A0A0A6YY41 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ighv1-47A0A0A6YY41 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-47A0A0A6YY41 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-47A0A0A6YY41 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-47A0A0A6YY41 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-47A0A0A6YY41 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-47A0A0A6YY41 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-47A0A0A6YY41 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-47A0A0A6YY41 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-47A0A0A6YY41 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ighv1-47A0A0A6YY41 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-47A0A0A6YY41 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-47A0A0A6YY41 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-47A0A0A6YY41 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-47A0A0A6YY41 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-47A0A0A6YY41 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ighv1-47A0A0A6YY41 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv1-47A0A0A6YY41 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv1-47A0A0A6YY41 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ighv1-47A0A0A6YY41 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms