Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Trbc1A0A0A6YWV4 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbc1A0A0A6YWV4 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbc1A0A0A6YWV4 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.24■□□□□ 0.03
Trbc1A0A0A6YWV4 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.24■□□□□ 0.03
Trbc1A0A0A6YWV4 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.24■□□□□ 0.03
Trbc1A0A0A6YWV4 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.24■□□□□ 0.03
Trbc1A0A0A6YWV4 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbc1A0A0A6YWV4 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbc1A0A0A6YWV4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbc1A0A0A6YWV4 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbc1A0A0A6YWV4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trbc1A0A0A6YWV4 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbc1A0A0A6YWV4 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbc1A0A0A6YWV4 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbc1A0A0A6YWV4 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trbc1A0A0A6YWV4 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbc1A0A0A6YWV4 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbc1A0A0A6YWV4 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbc1A0A0A6YWV4 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbc1A0A0A6YWV4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trbc1A0A0A6YWV4 Actl10-202ENSMUST00000226583 1501 ntBASIC15.23■□□□□ 0.03
Trbc1A0A0A6YWV4 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
Trbc1A0A0A6YWV4 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbc1A0A0A6YWV4 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbc1A0A0A6YWV4 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trbc1A0A0A6YWV4 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbc1A0A0A6YWV4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbc1A0A0A6YWV4 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbc1A0A0A6YWV4 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbc1A0A0A6YWV4 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbc1A0A0A6YWV4 Gm6659-201ENSMUST00000174752 547 ntBASIC15.23■□□□□ 0.03
Trbc1A0A0A6YWV4 Gm21559-201ENSMUST00000220638 855 ntBASIC15.23■□□□□ 0.03
Trbc1A0A0A6YWV4 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbc1A0A0A6YWV4 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbc1A0A0A6YWV4 Gm8587-201ENSMUST00000076538 843 ntBASIC15.23■□□□□ 0.03
Trbc1A0A0A6YWV4 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbc1A0A0A6YWV4 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trbc1A0A0A6YWV4 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbc1A0A0A6YWV4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trbc1A0A0A6YWV4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Trbc1A0A0A6YWV4 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbc1A0A0A6YWV4 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbc1A0A0A6YWV4 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbc1A0A0A6YWV4 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trbc1A0A0A6YWV4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trbc1A0A0A6YWV4 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbc1A0A0A6YWV4 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbc1A0A0A6YWV4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbc1A0A0A6YWV4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbc1A0A0A6YWV4 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbc1A0A0A6YWV4 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbc1A0A0A6YWV4 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbc1A0A0A6YWV4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbc1A0A0A6YWV4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trbc1A0A0A6YWV4 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.22■□□□□ 0.03
Trbc1A0A0A6YWV4 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbc1A0A0A6YWV4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbc1A0A0A6YWV4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbc1A0A0A6YWV4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbc1A0A0A6YWV4 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Trbc1A0A0A6YWV4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Trbc1A0A0A6YWV4 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.22■□□□□ 0.03
Trbc1A0A0A6YWV4 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trbc1A0A0A6YWV4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbc1A0A0A6YWV4 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbc1A0A0A6YWV4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbc1A0A0A6YWV4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbc1A0A0A6YWV4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trbc1A0A0A6YWV4 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbc1A0A0A6YWV4 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbc1A0A0A6YWV4 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbc1A0A0A6YWV4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trbc1A0A0A6YWV4 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbc1A0A0A6YWV4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trbc1A0A0A6YWV4 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trbc1A0A0A6YWV4 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trbc1A0A0A6YWV4 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.21■□□□□ 0.03
Trbc1A0A0A6YWV4 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbc1A0A0A6YWV4 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbc1A0A0A6YWV4 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbc1A0A0A6YWV4 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbc1A0A0A6YWV4 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.21■□□□□ 0.03
Trbc1A0A0A6YWV4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trbc1A0A0A6YWV4 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbc1A0A0A6YWV4 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbc1A0A0A6YWV4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbc1A0A0A6YWV4 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbc1A0A0A6YWV4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbc1A0A0A6YWV4 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trbc1A0A0A6YWV4 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Trbc1A0A0A6YWV4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trbc1A0A0A6YWV4 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbc1A0A0A6YWV4 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbc1A0A0A6YWV4 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbc1A0A0A6YWV4 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbc1A0A0A6YWV4 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbc1A0A0A6YWV4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbc1A0A0A6YWV4 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbc1A0A0A6YWV4 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms