Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv23A0A0A6YWQ1 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv23A0A0A6YWQ1 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv23A0A0A6YWQ1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trbv23A0A0A6YWQ1 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv23A0A0A6YWQ1 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv23A0A0A6YWQ1 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Trbv23A0A0A6YWQ1 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv23A0A0A6YWQ1 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv23A0A0A6YWQ1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.31□□□□□ -0.12
Trbv23A0A0A6YWQ1 Gm10653-202ENSMUST00000139570 835 ntBASIC14.31□□□□□ -0.12
Trbv23A0A0A6YWQ1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.31□□□□□ -0.12
Trbv23A0A0A6YWQ1 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.31□□□□□ -0.12
Trbv23A0A0A6YWQ1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv23A0A0A6YWQ1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv23A0A0A6YWQ1 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv23A0A0A6YWQ1 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.31□□□□□ -0.12
Trbv23A0A0A6YWQ1 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv23A0A0A6YWQ1 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
Trbv23A0A0A6YWQ1 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv23A0A0A6YWQ1 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv23A0A0A6YWQ1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv23A0A0A6YWQ1 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv23A0A0A6YWQ1 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.31□□□□□ -0.12
Trbv23A0A0A6YWQ1 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv23A0A0A6YWQ1 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbv23A0A0A6YWQ1 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trbv23A0A0A6YWQ1 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv23A0A0A6YWQ1 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trbv23A0A0A6YWQ1 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv23A0A0A6YWQ1 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv23A0A0A6YWQ1 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv23A0A0A6YWQ1 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv23A0A0A6YWQ1 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv23A0A0A6YWQ1 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.3□□□□□ -0.12
Trbv23A0A0A6YWQ1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv23A0A0A6YWQ1 Gm20760-201ENSMUST00000179197 648 ntBASIC14.3□□□□□ -0.12
Trbv23A0A0A6YWQ1 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.3□□□□□ -0.12
Trbv23A0A0A6YWQ1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv23A0A0A6YWQ1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.3□□□□□ -0.12
Trbv23A0A0A6YWQ1 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv23A0A0A6YWQ1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv23A0A0A6YWQ1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.3□□□□□ -0.12
Trbv23A0A0A6YWQ1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv23A0A0A6YWQ1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv23A0A0A6YWQ1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.3□□□□□ -0.12
Trbv23A0A0A6YWQ1 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv23A0A0A6YWQ1 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv23A0A0A6YWQ1 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv23A0A0A6YWQ1 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv23A0A0A6YWQ1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbv23A0A0A6YWQ1 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv23A0A0A6YWQ1 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv23A0A0A6YWQ1 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv23A0A0A6YWQ1 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv23A0A0A6YWQ1 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv23A0A0A6YWQ1 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv23A0A0A6YWQ1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv23A0A0A6YWQ1 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv23A0A0A6YWQ1 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.29□□□□□ -0.12
Trbv23A0A0A6YWQ1 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv23A0A0A6YWQ1 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.29□□□□□ -0.12
Trbv23A0A0A6YWQ1 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv23A0A0A6YWQ1 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv23A0A0A6YWQ1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv23A0A0A6YWQ1 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv23A0A0A6YWQ1 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv23A0A0A6YWQ1 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trbv23A0A0A6YWQ1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv23A0A0A6YWQ1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv23A0A0A6YWQ1 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv23A0A0A6YWQ1 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trbv23A0A0A6YWQ1 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.29□□□□□ -0.12
Trbv23A0A0A6YWQ1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.29□□□□□ -0.12
Trbv23A0A0A6YWQ1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv23A0A0A6YWQ1 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbv23A0A0A6YWQ1 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv23A0A0A6YWQ1 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv23A0A0A6YWQ1 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trbv23A0A0A6YWQ1 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv23A0A0A6YWQ1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trbv23A0A0A6YWQ1 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv23A0A0A6YWQ1 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv23A0A0A6YWQ1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Trbv23A0A0A6YWQ1 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv23A0A0A6YWQ1 Gm18666-201ENSMUST00000190039 958 ntBASIC14.28□□□□□ -0.12
Trbv23A0A0A6YWQ1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv23A0A0A6YWQ1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv23A0A0A6YWQ1 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv23A0A0A6YWQ1 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv23A0A0A6YWQ1 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv23A0A0A6YWQ1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv23A0A0A6YWQ1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trbv23A0A0A6YWQ1 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Trbv23A0A0A6YWQ1 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv23A0A0A6YWQ1 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv23A0A0A6YWQ1 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv23A0A0A6YWQ1 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv23A0A0A6YWQ1 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv23A0A0A6YWQ1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms