Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav21-dv12A0A075B6C4 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav21-dv12A0A075B6C4 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav21-dv12A0A075B6C4 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Trav21-dv12A0A075B6C4 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav21-dv12A0A075B6C4 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav21-dv12A0A075B6C4 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav21-dv12A0A075B6C4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav21-dv12A0A075B6C4 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav21-dv12A0A075B6C4 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav21-dv12A0A075B6C4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav21-dv12A0A075B6C4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav21-dv12A0A075B6C4 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav21-dv12A0A075B6C4 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav21-dv12A0A075B6C4 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav21-dv12A0A075B6C4 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Trav21-dv12A0A075B6C4 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav21-dv12A0A075B6C4 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav21-dv12A0A075B6C4 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav21-dv12A0A075B6C4 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC12.77□□□□□ -0.37
Trav21-dv12A0A075B6C4 Gm27000-201ENSMUST00000182943 842 ntBASIC12.77□□□□□ -0.37
Trav21-dv12A0A075B6C4 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.77□□□□□ -0.37
Trav21-dv12A0A075B6C4 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.77□□□□□ -0.37
Trav21-dv12A0A075B6C4 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav21-dv12A0A075B6C4 Gm10812-201ENSMUST00000099864 546 ntBASIC12.77□□□□□ -0.37
Trav21-dv12A0A075B6C4 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav21-dv12A0A075B6C4 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav21-dv12A0A075B6C4 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav21-dv12A0A075B6C4 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trav21-dv12A0A075B6C4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav21-dv12A0A075B6C4 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav21-dv12A0A075B6C4 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav21-dv12A0A075B6C4 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav21-dv12A0A075B6C4 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav21-dv12A0A075B6C4 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav21-dv12A0A075B6C4 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav21-dv12A0A075B6C4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav21-dv12A0A075B6C4 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav21-dv12A0A075B6C4 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav21-dv12A0A075B6C4 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav21-dv12A0A075B6C4 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trav21-dv12A0A075B6C4 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav21-dv12A0A075B6C4 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav21-dv12A0A075B6C4 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav21-dv12A0A075B6C4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav21-dv12A0A075B6C4 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav21-dv12A0A075B6C4 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav21-dv12A0A075B6C4 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav21-dv12A0A075B6C4 AC107711.5-202ENSMUST00000226429 702 ntBASIC12.76□□□□□ -0.37
Trav21-dv12A0A075B6C4 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav21-dv12A0A075B6C4 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav21-dv12A0A075B6C4 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav21-dv12A0A075B6C4 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav21-dv12A0A075B6C4 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trav21-dv12A0A075B6C4 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav21-dv12A0A075B6C4 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav21-dv12A0A075B6C4 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav21-dv12A0A075B6C4 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav21-dv12A0A075B6C4 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Trav21-dv12A0A075B6C4 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav21-dv12A0A075B6C4 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav21-dv12A0A075B6C4 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav21-dv12A0A075B6C4 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav21-dv12A0A075B6C4 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav21-dv12A0A075B6C4 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav21-dv12A0A075B6C4 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav21-dv12A0A075B6C4 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav21-dv12A0A075B6C4 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trav21-dv12A0A075B6C4 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 Gm715-201ENSMUST00000117865 831 ntBASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 Gm7791-201ENSMUST00000219066 539 ntBASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 Il3ra-202ENSMUST00000223589 738 ntBASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 Arhgef33-211ENSMUST00000225658 473 ntBASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav21-dv12A0A075B6C4 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms