Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9d-1A0A075B699 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.84□□□□□ -0.35
Trav9d-1A0A075B699 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9d-1A0A075B699 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav9d-1A0A075B699 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9d-1A0A075B699 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9d-1A0A075B699 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav9d-1A0A075B699 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav9d-1A0A075B699 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav9d-1A0A075B699 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.83□□□□□ -0.35
Trav9d-1A0A075B699 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9d-1A0A075B699 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9d-1A0A075B699 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9d-1A0A075B699 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9d-1A0A075B699 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9d-1A0A075B699 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9d-1A0A075B699 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9d-1A0A075B699 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9d-1A0A075B699 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9d-1A0A075B699 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9d-1A0A075B699 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9d-1A0A075B699 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.83□□□□□ -0.36
Trav9d-1A0A075B699 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9d-1A0A075B699 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9d-1A0A075B699 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9d-1A0A075B699 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav9d-1A0A075B699 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9d-1A0A075B699 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9d-1A0A075B699 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9d-1A0A075B699 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav9d-1A0A075B699 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9d-1A0A075B699 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9d-1A0A075B699 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav9d-1A0A075B699 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-1A0A075B699 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.82□□□□□ -0.36
Trav9d-1A0A075B699 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-1A0A075B699 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-1A0A075B699 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-1A0A075B699 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-1A0A075B699 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-1A0A075B699 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav9d-1A0A075B699 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-1A0A075B699 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-1A0A075B699 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav9d-1A0A075B699 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-1A0A075B699 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav9d-1A0A075B699 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-1A0A075B699 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-1A0A075B699 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Trav9d-1A0A075B699 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-1A0A075B699 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-1A0A075B699 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC12.82□□□□□ -0.36
Trav9d-1A0A075B699 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-1A0A075B699 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-1A0A075B699 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav9d-1A0A075B699 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-1A0A075B699 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-1A0A075B699 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-1A0A075B699 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-1A0A075B699 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-1A0A075B699 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav9d-1A0A075B699 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-1A0A075B699 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-1A0A075B699 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav9d-1A0A075B699 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 Gm27000-201ENSMUST00000182943 842 ntBASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 Gm9731-201ENSMUST00000209480 747 ntBASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav9d-1A0A075B699 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Trav9d-1A0A075B699 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms