Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav18A0A075B656 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav18A0A075B656 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trav18A0A075B656 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav18A0A075B656 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav18A0A075B656 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trav18A0A075B656 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav18A0A075B656 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav18A0A075B656 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav18A0A075B656 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav18A0A075B656 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav18A0A075B656 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav18A0A075B656 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav18A0A075B656 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav18A0A075B656 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav18A0A075B656 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav18A0A075B656 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Trav18A0A075B656 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav18A0A075B656 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav18A0A075B656 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav18A0A075B656 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.61□□□□□ -0.23
Trav18A0A075B656 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav18A0A075B656 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav18A0A075B656 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.61□□□□□ -0.23
Trav18A0A075B656 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.61□□□□□ -0.23
Trav18A0A075B656 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav18A0A075B656 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav18A0A075B656 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav18A0A075B656 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav18A0A075B656 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.61□□□□□ -0.23
Trav18A0A075B656 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav18A0A075B656 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav18A0A075B656 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav18A0A075B656 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav18A0A075B656 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav18A0A075B656 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav18A0A075B656 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav18A0A075B656 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav18A0A075B656 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav18A0A075B656 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav18A0A075B656 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav18A0A075B656 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav18A0A075B656 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.6□□□□□ -0.23
Trav18A0A075B656 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav18A0A075B656 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav18A0A075B656 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav18A0A075B656 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav18A0A075B656 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Trav18A0A075B656 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav18A0A075B656 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav18A0A075B656 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav18A0A075B656 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav18A0A075B656 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC13.6□□□□□ -0.23
Trav18A0A075B656 Il3ra-202ENSMUST00000223589 738 ntBASIC13.6□□□□□ -0.23
Trav18A0A075B656 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav18A0A075B656 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav18A0A075B656 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav18A0A075B656 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav18A0A075B656 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav18A0A075B656 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav18A0A075B656 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Trav18A0A075B656 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav18A0A075B656 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav18A0A075B656 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav18A0A075B656 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.59□□□□□ -0.23
Trav18A0A075B656 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav18A0A075B656 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav18A0A075B656 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav18A0A075B656 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Trav18A0A075B656 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav18A0A075B656 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav18A0A075B656 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.59□□□□□ -0.23
Trav18A0A075B656 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav18A0A075B656 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav18A0A075B656 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav18A0A075B656 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav18A0A075B656 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav18A0A075B656 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav18A0A075B656 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Trav18A0A075B656 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trav18A0A075B656 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.23
Trav18A0A075B656 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Trav18A0A075B656 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav18A0A075B656 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav18A0A075B656 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav18A0A075B656 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav18A0A075B656 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav18A0A075B656 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav18A0A075B656 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.58□□□□□ -0.24
Trav18A0A075B656 Gm13168-201ENSMUST00000121771 632 ntBASIC13.58□□□□□ -0.24
Trav18A0A075B656 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav18A0A075B656 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trav18A0A075B656 Gm20760-201ENSMUST00000179197 648 ntBASIC13.58□□□□□ -0.24
Trav18A0A075B656 Gm7791-201ENSMUST00000219066 539 ntBASIC13.58□□□□□ -0.24
Trav18A0A075B656 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav18A0A075B656 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav18A0A075B656 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav18A0A075B656 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav18A0A075B656 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav18A0A075B656 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms