Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Trav17A0A075B655 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav17A0A075B655 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav17A0A075B655 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav17A0A075B655 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav17A0A075B655 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC13.22□□□□□ -0.29
Trav17A0A075B655 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.22□□□□□ -0.29
Trav17A0A075B655 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav17A0A075B655 Gm18025-201ENSMUST00000221733 862 ntBASIC13.22□□□□□ -0.29
Trav17A0A075B655 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav17A0A075B655 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav17A0A075B655 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav17A0A075B655 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav17A0A075B655 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav17A0A075B655 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav17A0A075B655 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Trav17A0A075B655 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav17A0A075B655 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav17A0A075B655 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav17A0A075B655 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav17A0A075B655 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav17A0A075B655 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav17A0A075B655 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav17A0A075B655 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav17A0A075B655 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav17A0A075B655 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav17A0A075B655 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav17A0A075B655 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav17A0A075B655 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav17A0A075B655 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav17A0A075B655 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Trav17A0A075B655 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav17A0A075B655 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav17A0A075B655 Gm12382-201ENSMUST00000122005 922 ntBASIC13.21□□□□□ -0.29
Trav17A0A075B655 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC13.21□□□□□ -0.29
Trav17A0A075B655 Gm18284-201ENSMUST00000172604 624 ntBASIC13.21□□□□□ -0.29
Trav17A0A075B655 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav17A0A075B655 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav17A0A075B655 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav17A0A075B655 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav17A0A075B655 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav17A0A075B655 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav17A0A075B655 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav17A0A075B655 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav17A0A075B655 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav17A0A075B655 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav17A0A075B655 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Trav17A0A075B655 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav17A0A075B655 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav17A0A075B655 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav17A0A075B655 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Trav17A0A075B655 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav17A0A075B655 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav17A0A075B655 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav17A0A075B655 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav17A0A075B655 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav17A0A075B655 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav17A0A075B655 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav17A0A075B655 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav17A0A075B655 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav17A0A075B655 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav17A0A075B655 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav17A0A075B655 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav17A0A075B655 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav17A0A075B655 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav17A0A075B655 Gm13158-201ENSMUST00000122007 736 ntBASIC13.2□□□□□ -0.3
Trav17A0A075B655 Gm24841-201ENSMUST00000158676 357 ntBASIC13.2□□□□□ -0.3
Trav17A0A075B655 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav17A0A075B655 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav17A0A075B655 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav17A0A075B655 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav17A0A075B655 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav17A0A075B655 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav17A0A075B655 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav17A0A075B655 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav17A0A075B655 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav17A0A075B655 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav17A0A075B655 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav17A0A075B655 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav17A0A075B655 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav17A0A075B655 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav17A0A075B655 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav17A0A075B655 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Trav17A0A075B655 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.19□□□□□ -0.3
Trav17A0A075B655 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav17A0A075B655 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav17A0A075B655 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav17A0A075B655 Gm11249-201ENSMUST00000117071 859 ntBASIC13.19□□□□□ -0.3
Trav17A0A075B655 Gm12896-201ENSMUST00000118430 226 ntBASIC13.19□□□□□ -0.3
Trav17A0A075B655 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.19□□□□□ -0.3
Trav17A0A075B655 Gm17661-201ENSMUST00000170317 270 ntBASIC13.19□□□□□ -0.3
Trav17A0A075B655 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav17A0A075B655 Gm10517-202ENSMUST00000192970 758 ntBASIC13.19□□□□□ -0.3
Trav17A0A075B655 Gm42545-201ENSMUST00000202755 922 ntBASIC13.19□□□□□ -0.3
Trav17A0A075B655 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav17A0A075B655 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav17A0A075B655 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav17A0A075B655 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Trav17A0A075B655 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav17A0A075B655 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms