Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16A0A075B653 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16A0A075B653 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16A0A075B653 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.87□□□□□ -0.35
Trav16A0A075B653 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16A0A075B653 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16A0A075B653 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav16A0A075B653 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16A0A075B653 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16A0A075B653 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav16A0A075B653 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16A0A075B653 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav16A0A075B653 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16A0A075B653 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav16A0A075B653 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16A0A075B653 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16A0A075B653 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16A0A075B653 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16A0A075B653 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16A0A075B653 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16A0A075B653 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16A0A075B653 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
Trav16A0A075B653 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav16A0A075B653 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16A0A075B653 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16A0A075B653 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16A0A075B653 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16A0A075B653 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC12.86□□□□□ -0.35
Trav16A0A075B653 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
Trav16A0A075B653 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav16A0A075B653 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16A0A075B653 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trav16A0A075B653 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16A0A075B653 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16A0A075B653 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16A0A075B653 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16A0A075B653 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.86□□□□□ -0.35
Trav16A0A075B653 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16A0A075B653 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16A0A075B653 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16A0A075B653 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trav16A0A075B653 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16A0A075B653 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16A0A075B653 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16A0A075B653 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav16A0A075B653 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav16A0A075B653 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16A0A075B653 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav16A0A075B653 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Gm10654-201ENSMUST00000098653 1633 ntBASIC12.84□□□□□ -0.35
Trav16A0A075B653 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms