Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Appbp2os-202ENSMUST00000206972 447 ntBASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav8-1A0A075B641 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav8-1A0A075B641 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav8-1A0A075B641 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav8-1A0A075B641 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav8-1A0A075B641 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trav8-1A0A075B641 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav8-1A0A075B641 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav8-1A0A075B641 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav8-1A0A075B641 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav8-1A0A075B641 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav8-1A0A075B641 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav8-1A0A075B641 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav8-1A0A075B641 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav8-1A0A075B641 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav8-1A0A075B641 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav8-1A0A075B641 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC11.96□□□□□ -0.49
Trav8-1A0A075B641 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav8-1A0A075B641 Gm22325-201ENSMUST00000158904 308 ntBASIC11.96□□□□□ -0.49
Trav8-1A0A075B641 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav8-1A0A075B641 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC11.96□□□□□ -0.49
Trav8-1A0A075B641 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC11.96□□□□□ -0.49
Trav8-1A0A075B641 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav8-1A0A075B641 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav8-1A0A075B641 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trav8-1A0A075B641 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav8-1A0A075B641 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trav8-1A0A075B641 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav8-1A0A075B641 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav8-1A0A075B641 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav8-1A0A075B641 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav8-1A0A075B641 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav8-1A0A075B641 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav8-1A0A075B641 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Trav8-1A0A075B641 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav8-1A0A075B641 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav8-1A0A075B641 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav8-1A0A075B641 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav8-1A0A075B641 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav8-1A0A075B641 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav8-1A0A075B641 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav8-1A0A075B641 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Trav8-1A0A075B641 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav8-1A0A075B641 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav8-1A0A075B641 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav8-1A0A075B641 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav8-1A0A075B641 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav8-1A0A075B641 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav8-1A0A075B641 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav8-1A0A075B641 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav8-1A0A075B641 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav8-1A0A075B641 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav8-1A0A075B641 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC11.95□□□□□ -0.5
Trav8-1A0A075B641 Gm6139-201ENSMUST00000079261 882 ntBASIC11.95□□□□□ -0.5
Trav8-1A0A075B641 Wnt10b-206ENSMUST00000228546 2709 ntBASIC11.95□□□□□ -0.5
Trav8-1A0A075B641 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC11.95□□□□□ -0.5
Trav8-1A0A075B641 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav8-1A0A075B641 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav8-1A0A075B641 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav8-1A0A075B641 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav8-1A0A075B641 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav8-1A0A075B641 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav8-1A0A075B641 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav8-1A0A075B641 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC11.95□□□□□ -0.5
Trav8-1A0A075B641 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav8-1A0A075B641 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav8-1A0A075B641 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav8-1A0A075B641 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav8-1A0A075B641 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav8-1A0A075B641 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav8-1A0A075B641 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav8-1A0A075B641 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav8-1A0A075B641 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav8-1A0A075B641 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav8-1A0A075B641 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav8-1A0A075B641 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC11.94□□□□□ -0.5
Trav8-1A0A075B641 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav8-1A0A075B641 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav8-1A0A075B641 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav8-1A0A075B641 Gm27454-201ENSMUST00000185090 204 ntBASIC11.94□□□□□ -0.5
Trav8-1A0A075B641 Cdc34b-202ENSMUST00000188741 1252 ntBASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 7.2 ms