Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9n-4A0A075B631 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9n-4A0A075B631 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9n-4A0A075B631 Gm28265-201ENSMUST00000188201 2319 ntBASIC11.37□□□□□ -0.59
Trav9n-4A0A075B631 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9n-4A0A075B631 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9n-4A0A075B631 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9n-4A0A075B631 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9n-4A0A075B631 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9n-4A0A075B631 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9n-4A0A075B631 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9n-4A0A075B631 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC11.36□□□□□ -0.59
Trav9n-4A0A075B631 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trav9n-4A0A075B631 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9n-4A0A075B631 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9n-4A0A075B631 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9n-4A0A075B631 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9n-4A0A075B631 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9n-4A0A075B631 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9n-4A0A075B631 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9n-4A0A075B631 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9n-4A0A075B631 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9n-4A0A075B631 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9n-4A0A075B631 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trav9n-4A0A075B631 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9n-4A0A075B631 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9n-4A0A075B631 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9n-4A0A075B631 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trav9n-4A0A075B631 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9n-4A0A075B631 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9n-4A0A075B631 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trav9n-4A0A075B631 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9n-4A0A075B631 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav9n-4A0A075B631 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9n-4A0A075B631 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9n-4A0A075B631 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9n-4A0A075B631 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9n-4A0A075B631 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9n-4A0A075B631 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trav9n-4A0A075B631 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9n-4A0A075B631 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9n-4A0A075B631 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9n-4A0A075B631 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9n-4A0A075B631 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9n-4A0A075B631 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9n-4A0A075B631 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9n-4A0A075B631 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9n-4A0A075B631 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav9n-4A0A075B631 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9n-4A0A075B631 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC11.35□□□□□ -0.59
Trav9n-4A0A075B631 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9n-4A0A075B631 Gm10698-201ENSMUST00000182663 604 ntBASIC11.35□□□□□ -0.59
Trav9n-4A0A075B631 AC107711.5-202ENSMUST00000226429 702 ntBASIC11.35□□□□□ -0.59
Trav9n-4A0A075B631 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav9n-4A0A075B631 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9n-4A0A075B631 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav9n-4A0A075B631 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9n-4A0A075B631 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9n-4A0A075B631 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9n-4A0A075B631 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9n-4A0A075B631 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9n-4A0A075B631 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9n-4A0A075B631 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9n-4A0A075B631 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav9n-4A0A075B631 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9n-4A0A075B631 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9n-4A0A075B631 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9n-4A0A075B631 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9n-4A0A075B631 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Gm18958-201ENSMUST00000174258 762 ntBASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Gm9731-201ENSMUST00000209480 747 ntBASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms