Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16d-dv11A0A075B617 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav16d-dv11A0A075B617 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16d-dv11A0A075B617 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16d-dv11A0A075B617 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16d-dv11A0A075B617 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav16d-dv11A0A075B617 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16d-dv11A0A075B617 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16d-dv11A0A075B617 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16d-dv11A0A075B617 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.25□□□□□ -0.45
Trav16d-dv11A0A075B617 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16d-dv11A0A075B617 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16d-dv11A0A075B617 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16d-dv11A0A075B617 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16d-dv11A0A075B617 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav16d-dv11A0A075B617 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16d-dv11A0A075B617 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav16d-dv11A0A075B617 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav16d-dv11A0A075B617 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16d-dv11A0A075B617 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16d-dv11A0A075B617 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.24□□□□□ -0.45
Trav16d-dv11A0A075B617 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16d-dv11A0A075B617 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Trav16d-dv11A0A075B617 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16d-dv11A0A075B617 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16d-dv11A0A075B617 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16d-dv11A0A075B617 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trav16d-dv11A0A075B617 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16d-dv11A0A075B617 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC12.24□□□□□ -0.45
Trav16d-dv11A0A075B617 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav16d-dv11A0A075B617 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16d-dv11A0A075B617 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC12.24□□□□□ -0.45
Trav16d-dv11A0A075B617 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16d-dv11A0A075B617 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16d-dv11A0A075B617 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16d-dv11A0A075B617 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16d-dv11A0A075B617 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16d-dv11A0A075B617 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16d-dv11A0A075B617 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16d-dv11A0A075B617 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16d-dv11A0A075B617 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16d-dv11A0A075B617 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16d-dv11A0A075B617 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav16d-dv11A0A075B617 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16d-dv11A0A075B617 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16d-dv11A0A075B617 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16d-dv11A0A075B617 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16d-dv11A0A075B617 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16d-dv11A0A075B617 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16d-dv11A0A075B617 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16d-dv11A0A075B617 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav16d-dv11A0A075B617 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Trav16d-dv11A0A075B617 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16d-dv11A0A075B617 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC12.23□□□□□ -0.45
Trav16d-dv11A0A075B617 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav16d-dv11A0A075B617 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav16d-dv11A0A075B617 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16d-dv11A0A075B617 Gm2399-201ENSMUST00000104944 225 ntBASIC12.23□□□□□ -0.45
Trav16d-dv11A0A075B617 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC12.23□□□□□ -0.45
Trav16d-dv11A0A075B617 Mir2861-201ENSMUST00000175539 82 ntBASIC12.23□□□□□ -0.45
Trav16d-dv11A0A075B617 Zfp783-201ENSMUST00000095946 670 ntBASIC12.23□□□□□ -0.45
Trav16d-dv11A0A075B617 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16d-dv11A0A075B617 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16d-dv11A0A075B617 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16d-dv11A0A075B617 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Trav16d-dv11A0A075B617 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16d-dv11A0A075B617 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav16d-dv11A0A075B617 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16d-dv11A0A075B617 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16d-dv11A0A075B617 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16d-dv11A0A075B617 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav16d-dv11A0A075B617 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav16d-dv11A0A075B617 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16d-dv11A0A075B617 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.22□□□□□ -0.45
Trav16d-dv11A0A075B617 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16d-dv11A0A075B617 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16d-dv11A0A075B617 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16d-dv11A0A075B617 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16d-dv11A0A075B617 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16d-dv11A0A075B617 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC12.22□□□□□ -0.45
Trav16d-dv11A0A075B617 AC107711.5-202ENSMUST00000226429 702 ntBASIC12.22□□□□□ -0.45
Trav16d-dv11A0A075B617 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16d-dv11A0A075B617 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16d-dv11A0A075B617 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav16d-dv11A0A075B617 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16d-dv11A0A075B617 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16d-dv11A0A075B617 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16d-dv11A0A075B617 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16d-dv11A0A075B617 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16d-dv11A0A075B617 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16d-dv11A0A075B617 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16d-dv11A0A075B617 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16d-dv11A0A075B617 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav16d-dv11A0A075B617 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16d-dv11A0A075B617 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav16d-dv11A0A075B617 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16d-dv11A0A075B617 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16d-dv11A0A075B617 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16d-dv11A0A075B617 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav16d-dv11A0A075B617 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms