Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav4n-4A0A075B615 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav4n-4A0A075B615 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav4n-4A0A075B615 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav4n-4A0A075B615 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav4n-4A0A075B615 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav4n-4A0A075B615 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4n-4A0A075B615 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4n-4A0A075B615 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4n-4A0A075B615 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4n-4A0A075B615 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4n-4A0A075B615 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4n-4A0A075B615 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4n-4A0A075B615 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4n-4A0A075B615 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4n-4A0A075B615 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4n-4A0A075B615 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4n-4A0A075B615 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trav4n-4A0A075B615 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4n-4A0A075B615 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4n-4A0A075B615 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC11.56□□□□□ -0.56
Trav4n-4A0A075B615 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4n-4A0A075B615 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4n-4A0A075B615 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4n-4A0A075B615 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4n-4A0A075B615 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4n-4A0A075B615 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4n-4A0A075B615 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trav4n-4A0A075B615 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4n-4A0A075B615 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4n-4A0A075B615 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4n-4A0A075B615 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav4n-4A0A075B615 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Ccdc166-201ENSMUST00000182172 2584 ntBASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Gm15820-201ENSMUST00000201566 728 ntBASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4n-4A0A075B615 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4n-4A0A075B615 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms