Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-1A0A075B606 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-1A0A075B606 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-1A0A075B606 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav13d-1A0A075B606 Gm14859-201ENSMUST00000117752 357 ntBASIC12.2□□□□□ -0.46
Trav13d-1A0A075B606 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-1A0A075B606 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav13d-1A0A075B606 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.2□□□□□ -0.46
Trav13d-1A0A075B606 Gm33142-201ENSMUST00000193913 867 ntBASIC12.2□□□□□ -0.46
Trav13d-1A0A075B606 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.2□□□□□ -0.46
Trav13d-1A0A075B606 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav13d-1A0A075B606 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav13d-1A0A075B606 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-1A0A075B606 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Trav13d-1A0A075B606 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-1A0A075B606 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-1A0A075B606 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-1A0A075B606 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-1A0A075B606 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-1A0A075B606 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-1A0A075B606 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-1A0A075B606 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-1A0A075B606 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-1A0A075B606 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-1A0A075B606 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-1A0A075B606 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-1A0A075B606 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-1A0A075B606 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Gm45774-201ENSMUST00000211992 2665 ntBASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-1A0A075B606 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav13d-1A0A075B606 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-1A0A075B606 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-1A0A075B606 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-1A0A075B606 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-1A0A075B606 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-1A0A075B606 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-1A0A075B606 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-1A0A075B606 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-1A0A075B606 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-1A0A075B606 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-1A0A075B606 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Trav13d-1A0A075B606 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-1A0A075B606 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-1A0A075B606 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-1A0A075B606 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav13d-1A0A075B606 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav13d-1A0A075B606 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav13d-1A0A075B606 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav13d-1A0A075B606 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-1A0A075B606 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-1A0A075B606 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-1A0A075B606 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav13d-1A0A075B606 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-1A0A075B606 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-1A0A075B606 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-1A0A075B606 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav13d-1A0A075B606 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-1A0A075B606 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Trav13d-1A0A075B606 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-1A0A075B606 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-1A0A075B606 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-1A0A075B606 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-1A0A075B606 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-1A0A075B606 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms